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Query: PF09852.9; Q10XG3_TRIEI/32-516; Predicted membrane protein (DUF2079 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RYYSFYASYDQGIFNQVFWNSMHGHFFQSSLSSALSTNVVHQGQVSEVYYHRLGQHFTPALLLWLPIYVLFPYPITLTVLQVTLISVSGLVLYILARQHLQPQLSAMMSISFYGANAVIGPTLANFHDICQIPLFVFSLLLAMEKRWWSLFWILAVLTLAVREDSGVVLFGVGFYLILSKRYPKIGLAICTLSFSYMIALTNLIMPVFSEDISQRFMMERFGQYTEGDQASTLEIIWGMMSNPWRLIKEIFTPFFGTLKYLLGQWLPLAFVPAVAPAAWMIAGFPLLKLFSAKGLSVLSITIRYAMTVVPGLFYGAILWWGKRESEVKNSPVPSPKFLRFWVVCICLSLFFTFTSNPNRTFYFLVPDSVKPWVYIPANEQWQHVSQMRPLLDKIPDDASVAATTYIIPHLSSRRAILRFPRMQFRNDAKKIEKVQYIIVDLWRLNRYRVAFKSDRQRLETIVPRIEELYNSGEYGITDFGDGVVLLast
1 -131.000PF09852.9; Q10XG3_TRIEI/32-516; Predicted membrane protein (DUF2079 topsan)  ali  100  1RYYSFYASYDQGIFNQVFWNSMHGHFFQSSLSSALSTNVVHQGQVSEVYYHRLGQHFTPALLLWLPIYVLFPYPITLTVLQVTLISVSGLVLYILARQHLQPQLSAMMSISFYGANAVIGPTLANFHDICQIPLFVFSLLLAMEKRWWSLFWILAVLTLAVREDSGVVLFGVGFYLILSKRYPKIGLAICTLSFSYMIALTNLIMPVFSEDISQRFMMERFGQYTEGDQASTLEIIWGMMSNPWRLIKEIFTPFFGTLKYLLGQWLPLAFVPAVAPAAWMIAGFPLLKLFSAKGLSVLSITIRYAMTVVPGLFYGAILWWGKRESEVKNSPVPSPKFLRFWVVCICLSLFFTFTSNPNRTFYFLVPDSVKPWVYIPANEQWQHVSQMRPLLDKIPDDASVAATTYIIPHLSSRRAILRFPRMQFRNDAKKIEKVQYIIVDLWRLNRYRVAFKSDRQRLETIVPRIEELYNSGEYGITDFGDGVVL 485
2 -19.900PF15971.5; D2RW44_HALTV/57-219; DolP-mannose mannosyltransferase  ali follow..  10  8....................................................VWDVNPPVPFAITAALAVLSGGNMYVILTLLVAAANILLVGWVAFLVTGEDAAAVAALTMLVVPELFLLPLAGVWAQFYALFFGVLSLALALRDRPFLAGVAAALSAGSWQSGIAFAPLVVGMTYQRTGGKDVLRAIAGGGVVTGVVVL............................................................................................................................................................................................................................................................................................ 163
3 -15.600PF13231.6; Q2YBZ2_NITMU/191-351; Dolichyl-phosphate-mannose-protein mannosyltransferase  ali follow..  11  1......................................................DHPPMVAWLIWLGTSIFGSEFGVRVGAFLCGLITMGYLFALTRNLYDSATGIRAVLLLAILPFFFATGALDAPLVAAWAATLYYLEQALIAQRERAWLIAFGLGILSKYTLGLVGIAALVFVIIDPVARR--WLRHPYPYLAVLLALLLFSPVI..................................................................................................................................................................................................................................................................................... 159
4 -12.100PF10131.9; R5JZI7_9CLOT/75-690; 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein  ali follow..  6  3.......................................................YWGPLSYYIMAGLMFLTSGDLLRLIAFVIFVVGGLPWILWGIHENRRVLGTFFGVLWFFMPYFTAGNLPQMVTTMLV-PYVIWFLWLYVRKKNNRAAVGLFVCMTL---MGVSAFLYLLIDQIWNKDTRRKIFALIYMICGILTAGIWVIPSLKG---------GLVTSESGDGSVMSTLIYPLTTSLNPFKRLSAGNDSFYFGLAAVLIAIAGILLARGGKKAGFVFLLIMLACTTPAAYRILVKLPFSQLFWMTRFAPMVYGFFFSACLEWVRLKKKYCVLLAALLCVDSISCM...................................................................................................................................... 304
5 -12.100PF03901.17; F4K887_ARATH/41-451; Alg9-like mannosyltransferase family  ali follow..  11  57.............................................................MLFAFLYKLLDTPYIMILMQSIFSAIGDLYLYKLSDALYGGNVATWSLFCQMANWFIFFCLNRTF-SNCLETVLTIMGLYYWYPVNRKWGLVIAALACAIRPTSAVIWLYVGMLELFLTPNKVKFIILEVIPIGSLVLGFTCLLDRL---------------MYGSWVIVPLNFLKFNFTHPWHWY---FTQGFLVMLFTFTPFSIAGIIKSKNQKLSALILWVLAIYSILGHK-----EFRFVLPVLPIALIFSGYAFAQMEVSGSSSSSSVTKKKQVPRQNHTKWSPKLRLSVYFLLAT........................................................................................................................... 360
6 -11.800PF05208.13; B7FU52_PHATC/1-358; ALG3 protein  ali follow..  11  18.....YTEIDWEAYMQEVEFWLDGELDYRKIYGGTGPLV----------------YPAGFLYLFAWLRKLTNSGNDIQTAQYIFAAFYVGTQFAVLLLYQQILSSWLGMAVLCLSKRIHSIFVLRLFNDGPTMLLLYISMLLFTWNRWNVGCVVFSMAVSIK--MNVLLFAPGLLLLLLQVGPDAQTVALRLGLGCALPQLILGAPFLTTYPVSYLRKAFELDR---------VFFYKWTVNFKFLPEEVFLSKGWAKILVALHVGTLAFCRISPEYVVYIMFLSNFIGIAFARTLHYQFYCWY-FHGLPYLLWSI......................................................................................................................................................................... 329
7 -10.700PF14264.6; R6ZZT7_9FIRM/33-352; Glucosyl transferase GtrII  ali follow..  9  31...........................................................ALPFMGIFNGPFSSPVINGFLTILFIILSVFFICDLFQIK-SKFFMFCIGCLLIAFPTVTSSLTFMFMTFVFTFSLLLEVLAVWLAVSFLISACLMATGLGIYQAYYQVACTVILIYGMQSKKALKLFCLLIVSMGIYLIMAKVGCFFSGKEMSVTYGAGSVPELLANLPHALTRCYRDFASVFYSDFRGISHNLVVRLLITVSFLIGICLYEALLLKILLLLFPIALIGFTMVSRGMDTL-TVYSYALI................................................................................................................................................................................ 319
8 -10.600PF09586.10; Q839W8_ENTFA/19-846; Bacterial membrane protein YfhO  ali follow..  11  34QFSNFHASF-LHGKQSLFYTWNAS----------------------------LGLNYLSLIYLGGLFTPLMPDALYFLTLLKIGSAGLSFWFLAKQTFKIPKWSHVTLSVSYALMSFIVAHSEL-WLDAFIYLPLVILGI-LMDQRKPTLLFVSYFLLFITNYYFGMIGLFSFLYYFARQRYKSRIVAYFTTSLLAGGASMIMVLPAVLDLRTNGETLSEIGVYDTTKYGSIPFIYIGLLPLIFCLFYFVTKEVPLKNKLLFGSLFVLLIASFYIT---------PLNLFWHGMHAPNMFLFRYSFLFSFLVILLAGYGWEKFEKDDLGVLSGLILILLAIFALAMILLLLLVSGEAIINTRAMVTGILDDWNYASRSLYSEPYPDLKNLVDQTKENDTFYRLENLNGVSANDGINYGYSGISMFSSVRNRHSSTYL-LGFRSRGTNLNIRYQNNTLLMDALMGIKYNIAENNFERQAAAGKYQL 571
9 -9.440PF04188.13; Q6NKT6_ARATH/13-489; Mannosyltransferase (PIG-V)  ali follow..  11  64......VVWDSVYFLRI---TECGYEYEQTYA------------------------FLPLLPFFISLLSRTVFAPLVFTVSNLAFIFAAIYLFRVSVIILDTEASFRASIIFCFNPA--SIFYSSIYSESLYALFSIGGVYHLLSGTSNVGVLWFALSGCARSNGILNAGYICFQTMHRAYEALYQKRRAYLAMQVFIAGFLRCI........................................................................................................................................................................................................................................................................................ 247
10 -9.360PF14897.6; D9S910_FIBSS/29-351; EpsG family  ali follow..  12  17...RWQIGTDWLPYYRMFEYNLS-------------------------------GMVEFGYVLFSTVVKTIRNDYSFFLLVIALIKYIAL-ACLIKRFSINPLISLCIAYAIFIP-------LLGMNRQFLALSVVFFSIYFIAEGKFSTFFLLICFASFFHKTALLFLPAYFLWNLKLEKKKTICILLAATVIGFIGVLNVLPL........................................................................................................................................................................................................................................................................................ 179
11 -9.120PF11847.8; V5X6I4_MYCNE/1-670; Alpha-(1  ali follow..  9  4............TFLQAPGQIAPDTKLDLTANPLRFLARAGDLWNSELPFGQAQNQAYGYLFPHGAFFLAVPGWVTQRLWWALLLTVGFWGLLRVAEAL-TTAARVVAAGAFALSPRVLGAISSETLPMMLAPWVLLPVIYVLRGDPLLAARSAAAVALMGAVNAVATLTGCIIWWAAHKPNRQWWRFTGWWLGCTALAVTWWAVALYIESSGVTTRWLSLTEMLRGTDTGSVAVLATTLVAAAGLAGLAMASMPSRGRLILILFVGVTALAVGYSGGLGSPIAAGVQLFLDADGTPLRNVHKLEPLLRLPIALGLAHLLGRIPLPGSVSRRTLVDAFAHPERDRRVAVGIVILTALAAGTSLAWTGRLTP----------------PGSFEAIPA----DTAAWLDEHNTDGGRVLVAP................................................................. 439
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 4 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.