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Query: PF09859.9; Q98JN4_RHILO/75-246; Oxygenase, catalysing oxidative methylation of damaged DNA, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GEYRYFRYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATHADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAFPLQVAILLSEPGKDFTGGEFALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVGIIFHDALast
1 -89.300PF09859.9; Q98JN4_RHILO/75-246; Oxygenase, catalysing oxidative methylation of damaged DNA  ali  100  1GEYRYFRYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATHADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAFPLQVAILLSEPGKDFTGGEFALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVGIIFHDA 172
2 -25.600PF13661.6; W5JJA0_ANODA/162-265; 2OG-Fe(II) oxygenase superfamily  ali follow..  20  1..............................................................ASCSMYNAGDYLLVHDDLLS--DRRIAYVFYLSREWQESDGGALLFRADQNSV-----------------TDRIFPRNNQLVLFRVCEKHQVGEVTVYPRLTINGWFH.. 91
3 -25.100PF13640.6; B4RGC0_PHEZH/142-243; 2OG-Fe(II) oxygenase superfamily  ali follow..  16  3................................................................FHQILAGGKLAIHADPVTQLYRRVNLLLYLNEGWEAAWGGDLELWNRDMD--ACVQRIAPLFNRTVVFSTTDVS------------FHGHPEPMTKVRRSLALYYY.. 102
4 -21.100PF03336.13; V006_FOWPN/11-355; Poxvirus C4/C10 protein  ali follow..  17  92...........................................................ENTVTLIMYEKGDYFARHRDVFSKNIICVHLLLYLEQ---PETGGETVIYID----------------------NNTSVKLKTDHLFDKTIEHESITVESGRKCVALFDVL.. 180
5 -18.800PF13759.6; Q1GR96_SPHAL/97-197; Putative 2OG-Fe(II) oxygenase  ali follow..  17  4................................................................VNILKPGGTHSGHIHPHSI----VSGTFYVAVPP---GSGALKLEDPRLPMLMAAPGRTDDAPEYLRPFVYAEPAAGRVFLWESWLRHEVMP-GKGERISISF..... 100
6 -13.700PF13532.6; D0N998_PHYIT/73-283; 2OG-Fe(II) oxygenase superfamily  ali follow..  17  74........TLPDSWKTYAQRSLDAAKKIDPLVMGSC-------------------KKMTPDICVVNFYKKAGRNGMHIDKDESDEA--SPVISFS-------GCAFAYIDHYPDPHEAVPIVRLESGDALVFGGPAR-----------TVVHALTRVYRSGRLNLTF..... 210
7 -12.600PF10014.9; A9IE89_BORPD/63-254; 2OG-Fe dioxygenase  ali follow..  16  55GIARHFAPIEPSIASG---KVLMSALELCRATFSGLAPFNHWHIEVHQFRIVATSAEGLPTPEGI-----------HRDG-----VSFVFMMLVNR--VNVLNGETGIYDRDRQELARYTLADP--LDAAIVN-------------DERTMHGVTPILAGYRDVLVI..... 191
8 -9.800PF05721.13; Q92PC6_RHIME/55-292; Phytanoyl-CoA dioxygenase (PhyH)  ali follow..  15  126......................................................................GASQSPHRDYHLSPVLTLQGAVAHCDMPVE-SGPTLFLPYSQTYLPGYLALKRPEFRTYF--HVQLPLEKGDVVFFNPALFHAAGSNRSAGIKRV....... 238
9 -8.990PF14033.6; E9CZC6_COCPS/29-529; Protein of unknown function (DUF4246 topsan)  ali follow..  14  366..........................................................................TWHVEGQLNERICASALYYYDC--ENITDSRLAFRASLFENSDAEVGYPQNHGPMVQELGSVSCKEGRLLTFPNTLQHRVQPFQPGHRKIVALFLVD. 479
10 -8.400PF02041.16; ABP1_ARATH/33-198; Auxin binding protein  ali follow..  17  45.............................................................EIWLQTFAPGSETPIHRHSCEE-------VFVV------LKGGTLYLAETHGNFPGKPIEFPIFANSTI--------------HIPINDAHQVKNTGHEDLQVLVII.... 125
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.