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Query: PF10017.9; L0GU32_9GAMM/37-337; Histidine-specific methyltransferase, SAM-dependent, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst IRAEVLAGLAAPAKYLPPKLFYDERGSQLFDAITELSEYYPTRTEIGILRAHGAEMAERLGRGSVLIELGSGSSLKIQTLLAALEPRVYIPVDISREHLLKSARALATRFEDVRIRATCADYSRDFELPLDPDWRDLAAFFPGSSIGNFEPTEARRLLTRVANLIGDGGRLLIGVDLPKDPLILEAAYDDAQGVTAVFNRNLLTRINRELDGDLDPQAFAHQARFNAVHSRVGMHLVSRTDQQVRVAGEVFSFRQGESIHTENSYKYDLTDFQRLAREAGFTTEQVWTDPEQLFSVHCLRRLast
1 -107.000PF10017.9; L0GU32_9GAMM/37-337; Histidine-specific methyltransferase, SAM-dependent  ali  100  1IRAEVLAGLAAPAKYLPPKLFYDERGSQLFDAITELSEYYPTRTEIGILRAHGAEMAERLGRGSVLIELGSGSSLKIQTLLAALEPRVYIPVDISREHLLKSARALATRFEDVRIRATCADYSRDFELPLDPDWRDLAAFFPGSSIGNFEPTEARRLLTRVANLIGDGGRLLIGVDLPKDPLILEAAYDDAQGVTAVFNRNLLTRINRELDGDLDPQAFAHQARFNAVHSRVGMHLVSRTDQQVRVAGEVFSFRQGESIHTENSYKYDLTDFQRLAREAGFTTEQVWTDPEQLFSVHCLRR 301
2 -14.600PF05891.12; NTM1_ORYSJ/61-283; AdoMet dependent proline di-methyltransferase  ali follow..  14  5.....................WYSKAIAYWQGVEASTEGVLVKGSDAFLRPLLAERFGAARRHLVALDCGSGIGRVTKNFLLRHFN-EVDLVEPVSHFLEAAQENLTECMEVGEDTHKAANFYCVPLQDFTPDEGRYDVIWIQWCIGQLPDDDFISFFNRAKIGLKPNGFFVLKENIARNGFVLDKETRSDAYFKELFKKCGLYIHSIKDQSDLPKELFA................................................................................. 216
3 -13.500PF06080.12; Q8YZS2_NOSS1/8-210; Protein of unknown function (DUF938 topsan)  ali follow..  20  9..........................................RNREPILEV----LLQVLPASGTILEIASGTGEHAIFFAPRLKPRKWLPSDPNPELRASITAWIAQFPSDNLYPPVELDASQSVERDAILQDAPIAAIVNINMIHISPWSACLGLLAGAGRILPPGGILYL................................................................................................................................ 138
4 -13.000PF12147.8; Q2K5I6_RHIEC/285-593; Putative methyltransferase  ali follow..  15  81...................YVYENKGRLIDKVFLEAIGWRGIRQRKLHLQELIEYGLKRLGRSTHLLDIAAGHGRYVLDAIEAARPDSARLQDYSPINVDAGRNSIARRGLNDFVSFHQQDAFD-GEGLAAITPAPDLAIVSGLYELFSDNAMIAASLSGIARAMQPGGLLIYTNQPWHPQLEMIARALTSHRGGQAWVMRR-----------------------------------------------------------------TQEEMDQLVAAAGFRKLEQRIDQWGIFTVSLAER 309
5 -12.200PF00891.18; ASMT_BOVIN/117-327; O-methyltransferase domain  ali follow..  18  4LAEAVREGRNQYLKA------FGIPSEELFSAIYRSEDFMQGLQDVWRLEGATVLAAFDLSPFPLICDLGGGSGALAKACVSLYPGCRAIVFDI--PGVVQIAKRHFSASEDERISFHEGDFFKDALPEAD-------LYILARVLHDWTDAKCSHLLQRVYRACRTGGGILV-IESLLDTDGRGPLTTLLYSLNMLVQTEGRERTPAEYRALLGPAGFR................................................................................. 211
6 -12.200PF07091.11; KRM_FRACC/28-281; Ribosomal RNA methyltransferase (FmrO)  ali follow..  14  81...................................MRVHASTRERLPYLREFYAAVFGAVPTPAVVQDLACGLNPLAFGSMGLPAQTTYLASDIDSQQMEFLDRALDLL--EVEHRVEVVDLVS-----GAVPAQHADVTLVLKTLPLLERQRA-GAGWELVDALRSPFVVV................................................................................................................................. 209
7 -12.100PF03291.16; MCES_YEAST/109-424; mRNA capping enzyme  ali follow..  16  2MTANRSINVDQIVRE-----HYNERTIIANRAKRNLSPIIKLRNFNNAIKYML--IDKYTKPGDVVLELGCGKGGDLRKYGAA-GISQFIGIDISNASIQEAHKRYRSRNLDYQVVLITGDLGVAVEPFPDCRFPCDIVSTQFCLHYAFTEEKARRALLNVAKSLKIGGHFFGTI--------------DSEFIRYKLNKFPKEVEKPSWGNSIYKVTFE------------NNSYQKNDYEFTSPYGQMYTYWLEDAIDNVPEYVVPFETLRSLADEYGLELVSQMPFNK.......... 266
8 -12.100PF08241.12; Q83DM1_COXBU/77-169; Methyltransferase domain  ali follow..  11  1..................................................................LDIGCAKGFLVKDFMKACPGLEAYGIDISEYALMNCEPEVVGRLHLGNADHL--PFPDNS------------AVISLNTVHNLPRERVIIALREIQRVSGGKAYI.................................................................................................................................. 93
9 -10.100PF12847.7; A9KI22_LACP7/3-153; Methyltransferase domain  ali follow..  13  1................................................LSKRLRMVADSVTKGNVVADVGCDHAYISIYLVEGKIAPKTIALDVNEGPLLRAQENIISYGMENLITTRLSD---GLHMLKPNEVDSIVIAGMGGAL-------MIRILEEGSECVAAAKELIL................................................................................................................................ 115
10 -9.990PF03848.14; TEHB_HAEIN/91-282; Tellurite resistance protein TehB  ali follow..  10  3.................................CKKEDYFSKKYNTTAIHGDVVDAAKIISPC-KVLDLGCGQGRNSLYL--SLLGYDVTSWDHNENSIAFLNETKEKE--NLNISTALYDINA-------NIQENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIPFSFTFAENELKEYYKD............................................................................................................... 161
11 -9.830PF01234.17; INMT_MOUSE/1-260; NNMT/PNMT/TEMT family  ali follow..  15  16.............................FTPKDYLTTYYSFHSGPVSLQNLYQTFSTGGVGGDVLIDIGSGPTIYQ-LLSACEVFREIIVTDYTPQNLQELQKWLKKEPGAYDWSSIVQHACE--------------------------LEGDRSRWQEKEAKLRRTVTRVLRCDVTKTPPLGSAQVPLADCVLTFLAMECACPDIDT---------------YRAALRRLAGLLKPGGHLVTLVTLRFQHYMVGPK--KFSGVYLEKEVVEKAIQDAGCQVLK................ 235
12 -9.820PF03059.16; A3DUI9_MALBX/3-277; Nicotianamine synthase protein  ali follow..  15  62LIRLCGEAEGLLENHFSTILGSYEHPLDHLDIFPYYSNY-LSKLEFNILSQHF------TRMPIKIAFVGSGPLPLTSIVLASNTKTSFDNYDINASANSKALGLVSSD----RMVFHTTDIMD-----VTTALKDYEIVFLAALVGM-DKMEKLKIIDHLAKYMAPGATLML................................................................................................................................ 226
13 -9.810PF05401.11; Q98A39_RHILO/5-200; Nodulation protein S (NodS)  ali follow..  10  3...........................ELLNREMAADDPWRLDGNPFERERHTQILRLSLAQGANALEVGCAAGAFTERLAPICQ--RLTVIDVVEPAITRARLRM-KETPHISWI--------ISDVQQFSSDELFDLIVVAEVLYYVDLVQIRAAVRNLVGLLAPGGQLVFG............................................................................................................................... 141
14 -9.430PF01269.17; A8M8R8_CALMQ/9-236; Fibrillarin  ali follow..  12  69...........................................................ISEGSKVLYLGAASGTTVSHVSDIVGLNLIYGVEFSPRVFREFMQNIIDQ----NVIPILADARY----PEQYISLVKGVDVAYIDV--AQPFQAKILADNADVYLVKGGYIIL-VIKAMSIDVTKEPSETFKREIDTIKERGFDIINMVHLEPYDVAHA.................................................................................. 221
15 -9.100PF02390.17; TRMB_DROME/71-251; Putative methyltransferase  ali follow..  12  1.............................................................QQVSFADIGCGYGGFLVTLGEMFPEKLSIGMEIRVKVSDYVVDRIAALRRRCNIACLRTNAMKYLPNYFVKGQLEKMFFLYPDPHFKRAKHKNQALLSEYAYILRKGGLLYTMTDVEDLHKWIVTHMEEHP............................................................................................................. 142
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.