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current user: public |
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| Query: PF10177.9; W5KY66_ASTMX/13-159; Uncharacterised conserved protein (DUF2371 topsan), from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
| # | Score | Template | Links and tools | %id | First | RQDSLRTKNRAENKRRRKARKKRKNDIVVVKGKLNLCSVSGMAAAFGVLVLMVGIAMAVLGYWPRENLAHTVSLQRVNDATINSTKPIPPASRHVGFFEDFFSNYQYSDNLKVFGPLVMGIGIFLFICANAVLHENRDKKTKIINLR | Last |
| 1 | -90.800 | PF10177.9; W5KY66_ASTMX/13-159; Uncharacterised conserved protein (DUF2371 topsan) | ali | 100 | 1 | RQDSLRTKNRAENKRRRKARKKRKNDIVVVKGKLNLCSVSGMAAAFGVLVLMVGIAMAVLGYWPRENLAHTVSLQRVNDATINSTKPIPPASRHVGFFEDFFSNYQYSDNLKVFGPLVMGIGIFLFICANAVLHENRDKKTKIINLR | 147 |
| 2 | -10.500 | PF15471.6; F1S380_PIG/2-320; Transmembrane protein family 171 | ali follow.. | 22 | 76 | ....ARSRARLQQSEGRLRGNQGDSDRAFLCGE---SRQFVQCLIFGFLFLTSGMLISVLGIWVPGCG------SDWAQEPLNETDTADSESQICGFL-----------SLQILGPLIVLVGLCFFVVAHVKKRNNLNGGQD..... | 193 |
| 3 | -9.910 | PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174 | ali follow.. | 17 | 14 | ....................TPSTADIQVSDDD----KAGATLLFSGIFLGLVGITFTVMGWIKYQSVS-------------------------------------HFEWTQLLGPILLSVGVFILIAVCKFLCKESEERV...... | 100 |
| 4 | -9.840 | PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin | ali follow.. | 7 | 20 | .....................................CFWLECS--GKSYCSDSPSVENCTAENKTEDCSAATTTRPSPTSSSVTTQTTPNATATPVTPSPRKSSF--DAASFIGGIVLVLGVQAVVFFLYKFCKSKERNYHTL... | 122 |
| 5 | -9.610 | PF14927.6; C3ZI62_BRAFL/87-231; Neurensin | ali follow.. | 15 | 53 | .......................................WKVAMVCGFSLIAFGAVALMAGYLVPQRRELVGYLGGVPVVDSAA-----------------TDLNYKLDACKLAGLILLCVGGLTVAFSLLV............... | 128 |
| 6 | -9.240 | PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family | ali follow.. | 21 | 80 | ..............................................................................................................YKMCGPAFLSMGLMLLVCGLVIIRKKQKQRQK..... | 114 |
| 7 | -8.840 | PF06040.11; Q8UY74_9ADEN/13-145; Adenovirus E3 protein | ali follow.. | 13 | 1 | .............................IKAETATTPDFRVSKLQLFQPFLPGTYQCVSG--NTTASLPTNNQTNLHQRHRRDLSESNTTTHTGGELRGQPTSGIYYGPWEVVGLITLGLGGLLVLC................... | 109 |
| 8 | -8.840 | PF09925.9; R6I1F8_9PROT/8-142; Predicted membrane protein (DUF2157 topsan) | ali follow.. | 27 | 33 | ..............................................................................................................LLFLSCFCIGIGVIAVIAAN---WEAIPAAVKLGVD. | 65 |
| 9 | -8.790 | PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51 | ali follow.. | 17 | 4 | .....................................SQYALC-ALGVGLVALGVVMIVWSLVPANTGFNNSSSGSGGDDGIDGKRNKASSVA-----------------------VLAGSGVAMLLLSLCLGLRNKQREQL..... | 85 |
| 10 | -8.310 | PF17248.2; X4ZEP5_9BACL/28-177; Family of unknown function (DUF5317 topsan) | ali follow.. | 20 | 57 | ..............................................GFLFIFAGVFLNFLGKMPVSLDAAKVLDPYYVHLLESGTVATKHYLMDSATRLSFLGDIIPLTQVISIGDIVMNAGIFLYL.................... | 149 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |