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Query: PF10206.9; B5U217_NASVI/2-103; Mitochondrial F1F0-ATP synthase, subunit f, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100
# Score Template Links and tools%idFirst GFGDYPKEYNPAIHGVYDPARYYGPRDTPFGQVKVGELGAWIGRRNKSPQSFAALCSRAWWRWQHKYVQPKRTGVAPFFQLTFAGMALFYFLNYGRIKHHKNLast
1 -82.100PF10206.9; B5U217_NASVI/2-103; Mitochondrial F1F0-ATP synthase, subunit f  ali  100  1GFGDYPKEYNPAIHGVYDPARYYGPRDTPFGQVKVGELGAWIGRRNKSPQSFAALCSRAWWRWQHKYVQPKRTGVAPFFQLTFAGMALFYFLNYGRIKHHKN 102
2 -10.800PF10791.9; Q75BR8_ASHGO/2-93; Mitochondrial F1-F0 ATP synthase subunit F of fungi  ali follow..  10  27................................KRIANVVELYKALPQGPAPVRQA-TGMIGKYRAKYFDGDNASGKPIVHFAIFVLCLGYSMDYYHLR.... 92
3 -8.520PF14596.6; G3HW32_CRIGR/646-844; STAT6 C-terminal  ali follow..  10  161..GQGEAGGGSLGVQPLLQPSPYGQPGISMSHLDLRTNPSW............................................................. 199
4 -8.360PF16085.5; Q88IF9_PSEPK/1-113; Bacteriophage holin Hol, superfamily III  ali follow..  8  8..................................LVEMPIWLVIFLSLVGGVSGEMWRADMAGVSGWFIFRQVLLRSGACVVCGLSTIMLLYSAG....... 68
5 -7.540PF09782.9; Q2EN80_PIG/1-128; NADH:ubiquinone oxidoreductase, NDUFB6/B17 subunit  ali follow..  12  1............MSGYTPDEKLRLQQLRELRR-------RWLKDQELSPREFWNKFLQDGAPWKNVIYKTYRHSIFAVTHVLIPVWIIHYYLKYH....... 89
6 -7.140PF18363.1; A0A0A8UKJ1_LEGHA/212-314; Phosphoinositide phosphatase insertion domain  ali follow..  12  59..........................ASDLNSIANNKLPGWFASLGRQDQQLLRLFCE............................................ 90
7 -6.820PF11457.8; R5QCL0_9FIRM/6-147; Protein of unknown function (DUF3021 topsan)  ali follow..  12  69..................................IWEIDSWSLAKQSGVYFLIISVVMLPIAYFANWMKHSITGVLSYVGIFVMIFAAVWISQYLLWKRR.. 134
8 -6.800PF15102.6; TM154_HUMAN/24-165; TMEM154 protein family  ali follow..  20  117............................SVMEIEMEELDKWMNSMNRN...................................................... 136
9 -6.730PF15163.6; MEIG1_DANRE/16-90; Meiosis-expressed  ali follow..  16  3....RAKQWTGEVENLYRFQQAGYRDELEYRQIKQAEIDRW............................................................. 39
10 -6.680PF12256.8; Q2Y995_NITMU/552-715; Insecticide toxin TcdB middle/N-terminal region  ali follow..  12  61.LSRIDNGLGRVTTIEYATSTAEARRDQEQGQSWMSFLPVQVVSAVTIDDAISGLHNVTRYRYHEGHYDGYRREFDGFGRS..................... 142
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.