current user: public |
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Query: PF10583.9; F1MX64_BOVIN/1-68; Involucrin of squamous epithelia N-terminus, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . | |||||||
# | Score | Template | Links and tools | %id | First | MSQQHTLPVIQPPALSQESLKPASPPTNTQQEQVKQPTPLPAPCQKVHSELPGEVPLELGEKHTIVKG | Last |
1 | -62.800 | PF10583.9; F1MX64_BOVIN/1-68; Involucrin of squamous epithelia N-terminus | ali | 100 | 1 | MSQQHTLPVIQPPALSQESLKPASPPTNTQQEQVKQPTPLPAPCQKVHSELPGEVPLELGEKHTIVKG | 68 |
2 | -5.780 | PF15357.6; PS1C1_HUMAN/4-152; Psoriasis susceptibility 1 candidate 1 | ali follow.. | 27 | 85 | ..........LVPSSHPELFASVLPMAPEEAARLQQPQPLPPP......................... | 117 |
3 | -5.660 | PF15798.5; H2L8U9_ORYLA/154-284; Proline-rich AKT1 substrate 1 | ali follow.. | 10 | 63 | .....SLPVSVPVWGCKSNRAAQGDGNSGERVGCADLEHIAASMKALLVPGATDGTEMFGA....... | 118 |
4 | -5.520 | PF18197.1; G2J3Q6_PSEUL/54-107; Domain of unknown function (DUF5602 topsan) | ali follow.. | 6 | 6 | .......PISIGLVFTETALQGLPAAAAGGRADFPYQLGMPRKGPRTVVD.................. | 48 |
5 | -5.100 | PF17574.2; ITAS_BPT7/1-89; Inhibitor of toxin/antitoxin system (Gp4.5) | ali follow.. | 12 | 42 | .SKNHTQRMTLTDEQALRLVNALTKAAVTAIHEAGRVNEAMAILDKIDN................... | 89 |
6 | -4.840 | PF17905.1; A0A158PDZ3_ANGCS/162-256; GLD-3 KH domain 5 | ali follow.. | 12 | 14 | ...QGLLPMQLCFHAGNEDLRAKIEDKNRIVKFYDELLRVSVSVVPSDLESVTVLPGDQTRHYISLRT | 78 |
7 | -4.760 | PF18439.1; A0A0D2AW73_9EURO/3-34; Ubiquitin-Binding Zinc Finger | ali follow.. | 16 | 5 | ...........................................CGQCNETIESDRRDEHEDWHFAKK. | 28 |
8 | -4.700 | PF09496.10; C5GN29_AJEDR/145-364; Cenp-O kinetochore centromere component | ali follow.. | 17 | 55 | ...RHTIPIFVPTQLEQRYLSVPRGTNGADSAIAKSRKAPKQDLRSLVRELRQELVAWHLRCDAL... | 117 |
9 | -4.550 | PF10365.9; Q7MTE2_PORGI/1410-1571; Domain of unknown function (DUF2436 topsan) | ali follow.. | 13 | 78 | ...EYLIPANADPVVTTQNIGEVVIPGGVYDYCITNPEP............................. | 118 |
10 | -4.380 | PF03325.13; VPAP_HCMVM/116-281; Herpesvirus polymerase accessory protein | ali follow.. | 23 | 24 | .SENSAVHVDLDFGVVADLLKWIGPHTRVKRNVKKAPCPTGTVQILVHAGPP................ | 74 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Rychlewski L, Godzik A. Secondary structure prediction using segment similarity. Protein Eng. 1997 Oct;10(10):1143-53. |