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Query: PF10727.9; Q743Y6_MYCPA/8-128; Rossmann-like domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst RPARLKVGIISAGRVGTALGVALERADHVVVACSAISHASRQRAQRRLPDTPVATPPEVAAGAELLLLAVPDSELAGLVSGLAATEAVRAGTIVAHTSGANGVGILAPLTRQGCIPLAIHPLast
1 -62.100PF10727.9; Q743Y6_MYCPA/8-128; Rossmann-like domain  ali  100  1RPARLKVGIISAGRVGTALGVALERADHVVVACSAISHASRQRAQRRLPDTPVATPPEVAAGAELLLLAVPDSELAGLVSGLAATEAVRAGTIVAHTSGANGVGILAPLTRQGCIPLAIHP 121
2 -20.500PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  20  2..KDKTIAIMGYGSQGHAHARNLHESGLNVV-VGLRKGSSSWAKAES-DGLKVMTVEEAAKAADVIMILLPDEKQASVYYS-QIEPSLEAGNALVFAHG...................... 95
3 -18.200PF10100.9; H6NF63_9BACL/6-429; Staphylopine dehydrogenase  ali follow..  11  2.....RVLILGTGPASVQLAVTLKNKWNCCIGIAGRESVRSEPFFTALDESVFQGYGTITGEWDTLILAVTTDAYVAVLKQIHGELLKRVRCMLLLSPTFGSNRLVRHYMNG......... 132
4 -18.100PF03807.17; Q21544_CAEEL/2-98; NADP oxidoreductase coenzyme F420-dependent  ali follow..  20  1.....KIGFIGAGKMAQALARGLINSGRNIIASSPKRDEVFLDQCKALGLNTTHDNAEVVQKSDVVFLAVKPVHVSKVASEIAPA--LSKEHLVVSIALG..................... 97
5 -17.700PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  15  1......VAVIGSGSIGLLLYAYLKLANWPAL-LVTNRPEQADHLNKPISVTATPLSSFSAEEAEVGFITVKSFAVKALLPQLQRKK---WDGLVFFQNGMTHLEILRQIPARAICCGIV.. 122
6 -16.100PF13380.6; B9JVC9_AGRVS/19-138; CoA binding domain  ali follow..  12  2.....IIALTGASRPSHGVMHFLLNHGYRVIPV-----NPGQAGKDILRQTVFASLGDIPEPVDMIDVFRASEYLPAVVDEALGLKH--LPKVIWAQLGVRDDQAAARAEAAGIKVAIEYP 120
7 -16.000PF01210.23; GPDA_COXBU/7-162; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus  ali follow..  19  1.....PIAILGAGSWGTALALVLARKGQKVR-LWSYESDHVDEMQAE-TLKAYCDLKASLEGVTDILIVVPSFAFHEVITRMKPL--IDAKTRIAWGTKGLAKG................. 109
8 -14.600PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  12  11..HRSQALLIGAGETITLVARHLFEQGVKRIVVANRTLERASLLAEQFGAHAVSEIPEELANSDIVISSTASQLPILGKGAVERALKQRKHKPMFMVDIAVPRDI................ 115
9 -13.600PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  11  25.....VAVVAGYGDVGKGCAQSLSKMGARVLVT---EIDPINALQACMDGYQIVTMETAAPLSNIFVTTTGCRDI-----RGEHFAVMKEDAIVCNIGHF..................... 112
10 -13.300PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  16  1.....QIGVVGLAVMGSNLARNFARNGHTVA-VYNRSTDKTDKLATDGNFIPTKTVEDFVAALEAIVMVQAGAATDAVINQLADA--MEEGDIIIDGGNADTVCREKEMAARGR....... 117
11 -13.000PF02737.18; Q2YR99_BRUA2/5-183; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain  ali follow..  21  1.....TVGIIGAGQMGSGIAHVCALAGYNVLRQVASGKLQEEQRADAMKLIRPANSMEDLAGVDLAIEAATEDE-RKIFAQLCPV--LNPEAILATNTSSISITRLASTTDRPERFIGIH. 136
12 -12.400PF02254.18; Q92CZ9_LISMO/5-120; TrkA-N domain  ali follow..  13  1......FAVIGLGRFGGSICRSLVEQGMEVLAI-DSDEERVNEYMSIATHAVIANSTD-IRNFEHVIVAIGED-IQSSILTTLILKEMGVKYVTAKATNDKHAKLLDKI---GAD--VVHP 116
13 -11.400PF02826.19; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain  ali follow..  16  40.....TIGIVGLGAVGQAVGHIAAHGFDLKVVATTRSMQPAPEKVGFL------SIDALVEQSDIIVLCCPLTPETRGLISRERIARMKPNALLINVSPVVDDDALIEALREGRIGGA... 148
14 -10.800PF01113.20; DAPB_VIBCH/2-125; Dihydrodipicolinate reductase, N-terminus  ali follow..  13  1....VRIAIAGAGRMGRNLVKATHQNLSELGAGSERPESSLVGVIGKQGIVLVDNLEQAVEQFDVII----DFTAPASTLANLALCEQHGKKLVIGTTG-FTDAQRQTIEQAAKKIPIVM. 120
15 -10.800PF01408.22; YEAH_SCHPO/36-187; Oxidoreductase family, NAD-binding Rossmann fold  ali follow..  11  1....FKCAIFGCGGINFG--ELVLGHRLQVVALLSPHKSSHERVLKQKATREFYSADEYLEYLDAYIIGIPPE---------------------THGS-GADLELAILKRFPDASLFIEKP 126
16 -10.500PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain  ali follow..  12  2.....KISIIGAGFVGSTTAHWLAAKELGDIVLLDFVEGVPQGKALDLYEASPTNNYADTANSDVIVVTSG-DITRACISQAAPLS---PNAVIIMVNNPLDAMTYLAAEVSG........ 132
17 -10.400PF03721.14; UGDH_CAEEL/10-205; UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain  ali follow..  18  2.....KVVCVGAGYVGGPTCAMIAHKCPHILPIYEPGLDEIVFAARGRNLFFSSDIPKAIAEADLIFISVNTKYVESVSRTIAQY--AGGPKIVVEKS....................... 126
18 -10.400PF01118.24; DHAS_YEAST/6-132; Semialdehyde dehydrogenase, NAD binding domain  ali follow..  12  2......AGVLGAGSVGQRFILLLANHPHELKVLGASSRSAGKKYVDAVNWKQTDLLSEFFKECDIVFSGLDADYAGAIEKEFME-----AGIAIVSNAKNYRRE................. 109
19 -9.860PF00208.21; DHE3_ORYSJ/176-408; Glutamate/Leucine/Phenylalanine/Valine dehydrogenase  ali follow..  12  30..SGSTFVIQGLGNVGSWAAKLIHQKGGKIVAVGDVTRSEGGSLEDFYGAEVMDAAELLVHECDVLVPCALGGVLNR-----ENAAEVKARFIIEGANHPTDTEADEILAKKGVIV..... 155
20 -9.540PF13727.6; C3MA20_SINFN/126-306; CoA-binding domain  ali follow..  14  84.....RAVIVGGGTPARDLIRTIEHQDIRICGIFD-DRDERRSPHVIAGYPKLGTVDELVERIDMLIFSLPEKRILELLRKLWVLPV.................................. 175
21 -9.450PF02153.17; TYRA_BACSU/20-279; Prephenate dehydrogenase  ali follow..  1..................IALAIKKNHPRIIGIDISDEQAVAALKLGVIDDRADSFISGVKEAATVIIATPVEQTLVMLEELAHS--GIEHELLITDVGSTKQKVVDYADQSRYQFVGGHP 106
22 -9.410PF00389.30; Q9KCG9_BACHD/20-325; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain  ali follow..  17  136.....TLGIIGFGRIGSQIAKRAKAFEMTPYVF---DPFLTKARAEKLGVTVA-SLDDVLQVADIITVHTPLTKETKGLLGMKNIGKTKKGVFLINCAGIIDEEALKHYLREGHIAGA... 246
23 -9.320PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase  ali follow..  17  258.....IAVVCGYGDVGKGCAQSLRGQGARVIIT---EIDPICALQAAMEGYEVKTLDEVVSYADIFVTTTGNTGI-----SAAQMEKMKNRAIVGNIGHF..................... 345

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]