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Query: PF10849.8; Y03H_BPT4/26-95; Protein of unknown function (DUF2654 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst AERKANKLLSKNKRELNRLYKHAQIAAENNNFAQYEYAIKKSRDILKQPYNDELISILWKTTRSQIEDMILast
1 -55.800PF10849.8; Y03H_BPT4/26-95; Protein of unknown function (DUF2654 topsan)  ali  100  1AERKANKLLSKNKRELNRLYKHAQIAAENNNFAQYEYAIKKSRDILKQPYNDELISILWKTTRSQIEDMI 70
2 -5.970PF11546.8; Q2FZB7_STAA8/1-116; Staphylococcal complement inhibitor SCIN  ali follow..  25  74............KRTIMMNEYRAKAALKKNDFVSMADAKVALEKIYKE...................... 109
3 -5.870PF09847.9; O29125_ARCFU/30-435; Membrane protein of 12 TMs  ali follow..  22  348.........KGEEIYFPEVGFLKWIGLLLVNF-GAVYAVLSPRFILSQPVADIISSVLTLLAMTALFE.. 405
4 -5.580PF17507.2; Q8QQ35_CAMPS/1-75; Family of unknown function (DUF5439 topsan)  ali follow..  13  18.........SRNKRLISHRNTKVNNLIIEDYSVTIVINWYSIIIIDKVLFIHDVMFICWHSSEIDVW... 75
5 -5.420PF15467.6; M3ZIZ2_XIPMA/23-482; Secretogranin-3  ali follow..  16  396...KSESYLEAIRKNIEWLKKHNKD----EGKND--YDLSKLKDFMDQQVDSYIEKGIIAKDEGDTIKRI 456
6 -5.220PF06812.12; G8NPT7_GRAMM/8-131; ImpA, N-terminal, type VI secretion system  ali follow..  8  51VAKLAGEALANRSKDLHLAVWLGEALLKQEGISPLTSILQLCLDLQQN...................... 98
7 -5.040PF10911.8; B3VD60_9CAUD/1-77; Protein of unknown function (DUF2717 topsan)  ali follow..  11  3...TPINQLLKNPNDIPDVPRATAEYLQVRFNYAYLEASGHIGLMRANGCSEAHI............... 54
8 -4.990PF00031.21; CYTS_RAT/32-127; Cystatin domain  ali follow..  16  6........SSMEEEGASEALNYAVNEYNEKNSDLYLSRVVEVKDVQKQVVA................... 48
9 -4.860PF15142.6; G5BW93_HETGA/1-178; INCA1  ali follow..  11  74....PPEMLCRRRRRPRLDRMQQGPGGIPARVRAVAYHLEDLRR--RQRTINEIKKAQWGISEAA..... 132
10 -4.710PF09945.9; A4YT05_BRASO/10-130; Predicted membrane protein (DUF2177 topsan)  ali follow..  5  84...................................TFELTSLAMLKQWTWAVVALDISWGVLVTAVSATL 118
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li Z, Ye Y, Godzik A. Flexible Structural Neighborhood--a database of protein structural similarities and alignments. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D277-80.