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Query: PF10953.8; YAIZ_ECOLI/1-70; Protein of unknown function (DUF2754 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQLast
1 -71.400PF10953.8; YAIZ_ECOLI/1-70; Protein of unknown function (DUF2754 topsan)  ali  100  1MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVGLVTWVISFWLAGLIIRRRDEETENAQ 70
2 -7.870PF11200.8; A7AQJ9_BABBO/2-370; Protein of unknown function (DUF2981 topsan)  ali follow..  20  25......LHPSLTQLAWLLFGTNAISAVLGFMGALKRNIVMECVYLVFYAISLFLIFLTVLDMAE...... 82
3 -7.720PF17304.2; A0A194X8I6_9HELO/109-176; Family of unknown function (DUF5353 topsan)  ali follow..  23  5..............PVFIANAVAVVGLSAGLGF--GAYRKYAAGELSWKVVGIWTGVV............ 46
4 -7.670PF15192.6; TM213_HUMAN/29-107; TMEM213 family  ali follow..  25  37..............................TGVDEYGWIAAAVGWSLWFLTLILLCVLMKLTPDEPKDLQ 78
5 -7.340PF13074.6; A0A073KFW3_9BACI/25-122; Protein of unknown function (DUF3938 topsan)  ali follow..  25  41...................LLTMIGIVGGCLSYSITNYSAFFHGLWAWFIAFCLADMFNLLQSPQQENGN 98
6 -7.310PF10951.8; R5P0A3_9BACT/2-347; Protein of unknown function (DUF2776 topsan)  ali follow..  26  215.DYGEQDRKFWPKLVFFFGTISVIWGIVLILAMITTGFIMIGLGLVCFSISSLLLAKVWRQE........ 282
7 -7.170PF10998.8; B6K3H0_SCHJY/112-222; Protein of unknown function (DUF2838 topsan)  ali follow..  13  47.......KKGYQYFVADFCYWGNFFLAFYIWMFPNSE--AISYGTLAWSVVAWKNSLVFHSLDKITS... 111
8 -6.820PF13937.6; W8RPR5_9RHOB/7-84; Domain of unknown function (DUF4212 topsan)  ali follow..  10  9IRLVTYCLVIWALVSYGFAILLRLLSGIAVGGTDLGFWFAQQGSILVFLVLIFFYAWRMNKIDRE..... 74
9 -6.620PF17328.2; D3FV59_BACPE/27-184; Family of unknown function (DUF5366 topsan)  ali follow..  20  110............YFVYKVSDSLSILGLIGLIFFHIIFWSTFLIAVI........................ 143
10 -6.480PF04319.13; K9T856_9CYAN/14-86; NifZ domain  ali follow..  20  10VRVRKLIRNDGTFPGRDIGEVLAKKGDEGYVVSIGTYLQSYYI----YAVHFIDRDVVVGCRTKELEA.. 73

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.