Scheduled maintenance will begin on May 30th, 2025. Server will be temporarily unavailable — learn more.
current user: public
If you have questions about the server, please let us know.

Query: PF11139.8; A0QQE7_MYCS2/12-220; Sap, sulfolipid-1-addressing protein, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .
# Score Template Links and tools%idFirst LIPLAMVVALSPLSIIPAVLVLQTPRPRPTGLAFLGGWLVGMAALTALFIEVSNLFGRLDKPPVWASWLRIVLGTALIIFGVYRWLNRSKAAHTPKWMQSMGKLTPPRAGVTGVVLTIVNPKVLFICAAAGLAIGSAGLGQPQVWAAAIWFVVFASSTVALPILAYAVSGSKLDPTLARLGEWMERQHAVLVAVILVVIGLLVLYKGLHLast
1 -98.800PF11139.8; A0QQE7_MYCS2/12-220; Sap, sulfolipid-1-addressing protein  ali  100  1LIPLAMVVALSPLSIIPAVLVLQTPRPRPTGLAFLGGWLVGMAALTALFIEVSNLFGRLDKPPVWASWLRIVLGTALIIFGVYRWLNRSKAAHTPKWMQSMGKLTPPRAGVTGVVLTIVNPKVLFICAAAGLAIGSAGLGQPQVWAAAIWFVVFASSTVALPILAYAVSGSKLDPTLARLGEWMERQHAVLVAVILVVIGLLVLYKGLH 209
2 -20.200PF01810.18; RHTC_ECOLI/13-206; LysE type translocator  ali follow..  14  1.....IVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGIALLGLHLI---EKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAPAPQVELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVETLAWFTV--VASLFALPQMRRGYQRLAKWIDG----FAGALFAGFGIHLI..... 191
3 -12.900PF03596.13; Q9JXN6_NEIMB/16-206; Cadmium resistance transporter  ali follow..  14  9..............LIILMLFFAKRKSRKDIINIYLGQFLGSVSLILLSLLFAFVLDYIPSKE--------LLGLIPILLGIKVLLLGDSDGEAIAKEGLRKDNKNLIFLVAMITFASCGADNIGVFVPY------TTLNLANLIVALLTFLVMIYLLVFSAQKL---------AQVPSVGETLEKYSRWFVAVVYLGLGIYILVEN.. 182
4 -9.170PF02683.15; O66942_AQUAE/8-266; Cytochrome C biogenesis protein transmembrane region  ali follow..  18  5....GLLSFLSPLPIIPAYLSYISWKVFFSALYFVLGFTLVFTGLGASATFVGQLLHDYQE-IRVGSGLVIFFGLHFAGVFLWKHFLKVYIPIGIL-IEAKAEISYLGAFLMGVVFAFGWSPCIGPVLGSILFLASQQETVAKGALLLFVY----SIGLGIPFLLAGLLFSLFLNFVRSFSRYFKY--EIAGGVLLVSLGLLLA..... 258
5 -8.400PF01914.17; YCHE_ECOLI/8-210; MarC family integral membrane protein  ali follow..  13  9...IGLFALVNPVGIIPVFISMTSYQTAAARNKTNLTANLSVAIILWISLFLGDTI------GISIDSFRIAGGILVVTIAMSMISGKLGEDKQNKQEKSETAVRESIGVV---------PLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALFALCCWGLFRMAPWLVRVLRQTGINVITR---IMGLLLMALGIEFIVTGIK 200
6 -7.490PF12273.8; K1X614_MARBU/45-169; Chitin synthesis regulation, resistance to Congo red  ali follow..  15  2................................................................WVALILVVIFFLLMGYLFSITRRRRQRGLAPMY................................................................................................................ 34
7 -6.860PF15715.5; M3ZWV8_XIPMA/1-117; PCNA-associated factor histone like domain  ali follow..  13  3.........................RTKADSVPASYRKAVAASAPRKSLGSSLANASSSSSGHSSTLAKNKYAG------------NAVCPRPTPTWQKGIGDF......................................................................................................... 70
8 -6.620PF12437.8; L7VKV4_CLOSH/6-165; Glutamine synthetase type III N terminal  ali follow..  20  45.............................................................................VASVMKDWAIEKGATHFTHWFQPMTGITAEKHDSFGRAITEFSGKSLVKGEPDASSFPSGGLRSTFEARGYTAWAFIKDNTLYIPTAFCSYSGEALDKKTPLLRS........................... 160
9 -6.520PF13105.6; C2W8L3_BACCE/9-248; Protein of unknown function (DUF3959 topsan)  ali follow..  13  20....................................................................LSFYLGGLLFFTSFGSYYAKRMYSRICSWLA---------TIFITLLLGIWNQYVTASSLLANAKIAAC-IAVIPLIFRFRTYAITLGLLALWGGLLWDIKQTQSLAVLGRIMNLLTAERLYLLLLVVGFIFGGLLANMLK 151
10 -6.420PF02586.14; F1SPG3_PIG/1-259; SOS response associated peptidase (SRAP)  ali follow..  9  44.........KSPRSSTPVLLSRRHLEKGADS-GLVPSWFKEADPSKLQFNTTNCRSDTIMEKRSFKVPLSKGRRCVVLADGFYEWQRHPGTYQKQPYFIYFPQIKTEKSGSMGA--WEKVWDNWRLLTMAGIFDCWDPPEGGDCLYSYTIITVESCQGLNMPAIL---------DGEEAVSKWLDFGEVSAQEALKLIIAFHPVSTVVN 257
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;