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Query: PF11300.8; L0F544_DESDL/8-135; Protein of unknown function (DUF3102 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst RTPQVIATEINMIVHQTKKILLTNAIEIGRRLKEAKSLVEHGEWGKWLEESVSYSQSTACRLIRICEEYGASLPDGSGTSNLAPVPNLTYTQALLLLGLPEGEREEFIAKNDVATMTKQELQQALRDRLast
1 -67.200PF11300.8; L0F544_DESDL/8-135; Protein of unknown function (DUF3102 topsan)  ali  100  1RTPQVIATEINMIVHQTKKILLTNAIEIGRRLKEAKSLVEHGEWGKWLEESVSYSQSTACRLIRICEEYGASLPDGSGTSNLAPVPNLTYTQALLLLGLPEGEREEFIAKNDVATMTKQELQQALRDR 128
2 -30.900PF03677.13; D6YTD9_WADCW/1-238; Uncharacterised protein family (UPF0137 topsan)  ali follow..  16  68...NTDFSELVAITSEVKAINHQAALLHGERIKKAQRVLQEGAFTSWLIA-AYGNRQTPYNFLQYYEFYSLMP-----KGLHPQIEAMPRQAVYTLASREGELEKKQQIVENYNGETKSEVLHLIRE. 188
3 -8.630PF14251.6; K9TJ81_9CYAN/10-127; Domain of unknown function (DUF4346 topsan)  ali follow..  20  71RTAKELCVKIFEDKDSCSVTMLDHAAYLGREFMRAQMALVSGE--EYVQD.............................................................................. 118
4 -8.020PF17761.1; C9RRX6_FIBSS/16-152; DUF1016 topsan N-terminal domain  ali follow..  15  1........QIASILEQNRKSVAVAVYEIGRSIVENEQKGNIREVLKNLSARLTANYGKGFSTTNLKQMRDFYLTYQIGQTVSDQFVLSWSHYLFLMRIDNPDERKFYEIEAKNSNWSLRELKRQFDSA 133
5 -7.900PF02961.14; C3XZ01_BRAFL/2-89; Barrier to autointegration factor  ali follow..  11  18KPVTALAGIGGTLGGRLEEEGFDKAYVVGQFLVLKKN---EELFKEWLKSACNANSKQSGDCYTCLKEWCD......................................................... 86
6 -7.140PF14117.6; D0J295_COMT2/9-67; Domain of unknown function (DUF4287 topsan)  ali follow..  14  12..........................AYGKKILDELRDKKHMEQVAHLKLEHGIGHGHANALVAYHRA............................................................ 59
7 -6.730PF06062.11; Y3616_PHOLL/1-117; Uncharacterised protein family (UPF0231 topsan)  ali follow..  13  14.................................TSRFSMDHEAIGQWLNEEVKGDLAVIDKIASALAEIKGSERQWQLVGHEYTLLMDDEEVMVRANQLEFETDSSYYDKESLAFCGTKDFIDMLAD. 112
8 -6.360PF02720.17; Q73VY1_MYCPA/38-363; Domain of unknown function (DUF222 topsan)  ali follow..  10  2........RALERMEASRRRQIAVSHGVIAGLAGEGPGNVGGPVHKVIADRLRISYAEACRRLREAKQLSPRLTPATAGVWREGMLDGQHLRVIEVRDLPETTPVRALEEAEATLLRPDQLEKVAHQ. 138
9 -6.240PF04991.13; Q832Q2_ENTFA/24-252; LicD family  ali follow..  14  2.................RSNNLHYTLFYGTLIGVER----HKGFIPW-DIDIVMPRPDYELLIKILKN............................................................ 49
10 -6.140PF09181.10; SYP_METMP/394-460; Prolyl-tRNA synthetase, C-terminal  ali follow..  11  8NDVNSLSEKVKAKLLENK----------GIILIPFNESIYNEEFEELIDASLGLTTYEGKEYISVARTY........................................................... 67
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.