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Query: PF11350.8; Q9CCG9_MYCLE/130-339; Protein of unknown function (DUF3152 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst LPDGGAFTEAGDKTWHVVPGTMPQISQSATKVFKYSIEIENGLDPTMFGGDGAFAQMVDQTLANPKGWTHNPQFAFTRIDTGMPDFRISLVSPLTIRAGCGYEFRLETSCYNPSFGPDRQARVLINEARWLRGALPFEGDVGSYRQYVINHEVGHAIGYVRHEPCDKQGGLAPVMMQQTFSTSNNDGAKFDPEWVKPDGKTCRFNPWPYPLast
1 -114.000PF11350.8; Q9CCG9_MYCLE/130-339; Protein of unknown function (DUF3152 topsan)  ali  100  1LPDGGAFTEAGDKTWHVVPGTMPQISQSATKVFKYSIEIENGLDPTMFGGDGAFAQMVDQTLANPKGWTHNPQFAFTRIDTGMPDFRISLVSPLTIRAGCGYEFRLETSCYNPSFGPDRQARVLINEARWLRGALPFEGDVGSYRQYVINHEVGHAIGYVRHEPCDKQGGLAPVMMQQTFSTSNNDGAKFDPEWVKPDGKTCRFNPWPYP 210
2 -28.200PF00413.24; MMP27_TUPBE/105-261; Matrixin  ali follow..  18  3............................RKYNLTYRI-----MNYTPDMARADVDEAIQKAL---EVWSKVTPLTFTKIFKGIADIMIAFRTRVHGRCPRYFDGPLGVLGHAFPPGLGLGGDTHFDEDEWTKDTAGFS-------FLVAAHEFGHALGLSHSN------DQTALMFPNYVSLDPSKYP...................... 143
3 -20.200PF12388.8; H8MF84_CORCM/49-254; Dual-action HEIGH metallo-peptidase  ali follow..  11  19....................PLEEGSAEQYRTTNQVGTSVTKICVNPTAAFNSYSNLSQGLDLAIANYNEQGRLTFRGPTTCTANISAETTTGTGGQAGFPSNG-------------MPYGVFYIT---------GLDSYSADVNEHVITHELGHAIGFRHSDNTPTTATVGSVMNSCFRSTETGEWTGSDITALAA............. 199
4 -18.400PF02031.16; SNPA_STRCO/80-212; Streptomyces extracellular neutral proteinase (M7) family  ali follow..  16  1.............................AVTVYYSAT-----------NAPSFRSQISRSA---QIWSSVSNVRLAESSSG-ADFAYYEGNDSRGS--------------YASTDGHGSGYIFLDYRQ----------NQQYDSTRVTAHETGHVLGLPDHY----SGPCSELMSGGGPGPS........................... 112
5 -14.500PF11150.8; A0KJJ3_AERHH/42-243; Protein of unknown function (DUF2927 topsan)  ali follow..  8  8..............FFEVAMKREYGHEQNVHFSRW----EQPIRLKLVNEFGDKALQSEVVRVQSQHLAGIIGRPIALVSE-RPNITLIMTERAKMANWAKRTMGQDASVKTALKEGLCMANFTTNTRREMARATIIYSRAKGRFLDCVVEELTQVMGLPNDSDKVFPSIFNDNSIDSFPTGLDYVLLKLAYHPALQAGMTASEVRAALP 202
6 -14.100PF13583.6; Q3BQ26_XANC5/186-409; Metallo-peptidase family M12B Reprolysin-like  ali follow..  12  41..........................SDSQVNGRLRLIGTQQVNYTDSTTDDAALNDLTEASGT----SSLAALHSTR-DTQGADLVALLRPYRANQGACGVAWLNGGGLQSYNVNMQGSGYAAVSDGTDEEAGNYCED-------ITFAHEIGHNLGLAHDKADSGEGSFNTIMAYASDDQQRVPYFA-NPRITLCNGNPC........ 218
7 -13.600PF13574.6; C1GVV2_PARBA/302-508; Metallo-peptidase family M12B Reprolysin-like  ali follow..  14  54..................................................SDNGAPDISRRLNLFSAWRGQQQAFWTLMSNCRTGPEVGLAW---LGQLCNREAQSRRDPNNSESQTVSGANVVARTSN---------------EWQVLAHEVGHTFGAVHGSLCSESQEATS-LSPSSCDAGGQFIMNPTSGRGVTQFSPCSVG..... 199
8 -12.400PF01421.19; ADAM2_BOVIN/178-375; Reprolysin (M12B) family zinc metalloprotease  ali follow..  9  18.........................GADTTVVIQKIFQLTGLTNA-------FTSLNITVILSSLELWIDENKIPVTGDANELLH-YLVLRPHDMAFLLVYREKSNYIGATFQGRMCDKHYGGGVALHSSTISLESL--------AVIIAQLLSLSMGIPYDDKCHCPGDVC-IMNPAAVHSSGVKLFS--LRFISKPKSQCLQNQ---P 198
9 -12.200PF14891.6; U5QFP6_9CYAN/409-595; Effector protein  ali follow..  11  1......................................TDRPLTDE---EYDEFRDRVEDDIDQHRS-SPMGQQMLRDYDASGHDVTFRRIDNDNGYADWANRLNPSAPQPILGPN-GTGQDVTIG---YNPSFAPILSGKEETPNEVLHHEMSHGWGMLQRGTYTGSDEAQPVPNSERQAVG........................... 144
10 -11.700PF13688.6; ADMB_ASPFU/277-484; Metallo-peptidase family M12  ali follow..  14  57..................................TDKTCPETAPASTQWNMPCDQSNITQRLNLFSQWRGQQS-YWTLMSNCPTGSEVGLAW---LGQLCNTEVTGDGSNSV--------------------SGTNVVVRVSGGGWQVFAHESGHTFGAVHDCDSMTCAQNLEASSQCC----------------PYNRGTCDANG.... 192
11 -11.100PF07998.11; E7FHK3_PYRFU/1-194; Peptidase family M54  ali follow..  8  30......................RDVRLPINIVYAGKIILPPGTLIRVETASGFVNMYSFEAVVE----YGKLVEMRDDVNDDSITKIFGITTFP----IGSRDRYFDIYKKYLGIQVNVGDYHVLALSIKPFFTENKYLFIERVFKGVL-HEIGHLYGLSH---CHED-----CVMNPPKDIK---------DWDLRTPTYCN....... 186
12 -11.000PF02130.17; I4CA41_DESTA/10-143; Uncharacterized protein family UPF0054 topsan  ali follow..  15  6.................................................DLQELQKKTERILEDLGC-------------NADTVVSIAVVDNPEMAELNFQYRGKEGPTNVLSFSQREGGDIVISADRAADDAQALNYTNDEMVLYLLIHGILHLVGYEHQEP-----SQAFTMEQMVEEI............................ 130
13 -11.000PF04228.13; Q9RR98_DEIRA/22-306; Putative neutral zinc metallopeptidase  ali follow..  15  61....................................AQTQAQSQAQGGQAEDEDYQFADRIVASTRTWTQI----FQQSNRQYTKPTLVLFS-RSVSSACG-----QASSATGPFYCPLDSKLYLDTSFFNLMQRQLGGGGDFAYSYVIAHEVGHHV-------------------QNELGIARSEAEQNSYSVRLELQADCFAGVW... 213
14 -10.500PF05548.11; GLE_CHLRE/194-563; Gametolysin peptidase M11  ali follow..  11  1..............................RTIVYIMDFS-----SCGWPATLTPEKVTSDMLRGAS-APTNNLAYGACSYEKTLFNPDNFLVLGVPVPCIGGVTSTISWWDLSKAAEAYAQAIVGILQWRETCTSATCSAYVRGYSVIMHEAMHNYGLEHAGRGTLEGDATDVMGKGLLCPNAPNMYRI---------------GWAKP 184
15 -10.500PF01400.24; NAS7_CAEEL/87-274; Astacin (Peptidase family M12A)  ali follow..  15  13.................................................SPHYSPHERALLAKAVKQYHEKTCIRFVPRQTGEPDY-LFIGKVDGCFSEVGRTS----------------------------GVQVLSLDNGCMEYATIIHEMMHVVGFYHEHERWDRDNFIDIIWQNIDRGALDQFGKVDLSKTSYYGQP......... 135
16 -10.100PF06262.11; Q6ND73_RHOPA/32-129; Zincin-like metallopeptidase  ali follow..  12  8..............................................................................VDDFATEEVLDELGAETEFDVLGLFQGIGLPQRSSQDVAPMPNMIWLYRRPILDYWAEHDDSLGEIVRHVLVHEIGHHFGLSDDD............................................... 92
17 -9.960PF05572.13; A1ZK83_9BACT/167-317; Pregnancy-associated plasma protein-A  ali follow..  15  67...................................................................................................................................................SLTHEFGHFLGLEH------------TFKGGCTRGEGDKVSDTPATTGGEVSGDCSVN..... 112
18 -9.950PF10462.9; Q6LPV2_PHOPR/268-569; Peptidase M66  ali follow..  36  195...................................................................................................................................................EFSHEVGHNFGMG-HYPGGFSGSVHR..................................... 219
19 -9.820PF13582.6; A4AN81_MARSH/219-345; Metallo-peptidase family M12B Reprolysin-like  ali follow..  14  56............................................................................DSIGAQNYDVGHLFHKVANSSENGGNAGFIGAVCVDNRKGSAYSSKESPIGDTFDLD--------------YVAHEIGHQFGANH................................................. 126
20 -9.650PF10463.9; LIT_ECOLI/61-258; Peptidase U49  ali follow..  13  95.................................................................................................................................................AWILHHEISHVV--LQHPLVTTAFSTQEEREADSHATK........................... 130
21 -9.060PF16313.5; I0K4F5_9BACT/459-769; Met-zincin  ali follow..  17  14.................................................................................................................................................RFVSSHEVGHTLGLRHNFGSSHATPVEKLRDKAFIAQNGHTASIMD................... 59
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;