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Query: PF11799.8; B6QQ86_TALMQ/339-497; impB/mucB/samB family C-terminal domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .
# Score Template Links and tools%idFirst VMEARAVPTQISIEDSYRGLEHFEDVRKQLQLLSTSLIKRMRTDLIDEEVHKDTNQEDGTRWIAHPRTLRLSTRRRSPKNADGSRDYSYANGRTSRSGPVPKYMFSLAESAEAVAEKLVDDCLVSMFRKLHPDKAFGELSLINVAVTNMVETAGDNKQSLast
1 -88.100PF11799.8; B6QQ86_TALMQ/339-497; impB/mucB/samB family C-terminal domain  ali  100  1VMEARAVPTQISIEDSYRGLEHFEDVRKQLQLLSTSLIKRMRTDLIDEEVHKDTNQEDGTRWIAHPRTLRLSTRRRSPKNADGSRDYSYANGRTSRSGPVPKYMFSLAESAEAVAEKLVDDCLVSMFRKLHPDKAFGELSLINVAVTNMVETAGDNKQS 159
2 -7.520PF15888.5; A4V4V8_DROME/58-166; Folded gastrulation N-terminus  ali follow..  8  3.......AKSIHCPQGHTLFNQIPQSNIDPTDLVKQELILAGGSNGSPPPPPIGDYDYGDDEESEEIVYDLSVIPTAMQDGLPPSVGTGDQALPSEDAPLKFNIFE..................................................... 109
3 -6.170PF08738.10; E7LW60_YEASV/4-110; Gon7 family  ali follow..  18  45...DRDKPSEPERTKDGSQLTYLGQLRTQLTGLQDDLTGRMELAKNKKKAGADEKRIQEEI.................................................................................................. 106
4 -6.150PF02291.15; A5E2M9_LODEL/42-174; Transcription initiation factor IID, 31kD subunit  ali follow..  9  1...EAIVPRDVRLLHLIFATQGIQNYQDHVPLQLMDFAHRYTRGVLKDALVYNEHAKPAGASSSSSAALAIAARSNYQFKPVPPKELMLELAQERNSRPLP.......................................................... 109
5 -6.000PF18377.1; G1KHZ7_ANOCA/140-270; FERM F2 acyl-CoA binding protein-like domain  ali follow..  8  12....................................LFEQGKYDFINDVASLKDLRTEQEIHQFKNESLGMAVLHLCHIALKSGLSLEEVAQRTSFKECIPRSFCRQIQQNNYLTKFRIRNVFRRFLQR.............................. 104
6 -5.480PF10534.9; G3UIL3_LOXAF/87-179; Connector enhancer of kinase suppressor of ras  ali follow..  13  64................FAAVTDYSVTRNNVIQLCLELTTIVQQDCT................................................................................................................. 93
7 -5.350PF14959.6; H2ZU69_LATCH/334-441; gamma-Secretase-activating protein C-term  ali follow..  12  53......LPPGFQTLHTVLGVHCLP-IDHDILHLTEPFVVKLLKDLDNTETNEQ.......................................................................................................... 105
8 -5.110PF08066.12; V2XRV5_MONRO/27-118; PMC2NT (NUC016) domain  ali follow..  13  3TRNSMLLPVDIPYHRSMDS-KELDNFSARVISLANKLLTLAGTV................................................................................................................... 48
9 -5.080PF04210.13; Q12VV0_METBU/7-70; Tetrahydromethanopterin S-methyltransferase, subunit G  ali follow..  9  2......TPSVVTDPVDFNEVEKLNLIDEKIEFVNSEIAQRIGKKLGRD............................................................................................................... 44
10 -4.970PF13550.6; N0B519_9RHIZ/827-991; Putative phage tail protein  ali follow..  11  1....................DDTMSARDALQPLSLAYFFDSAYGLVEEHADDPLYEVTRAQETDLPASAKVRYISSADVYPQAVAEARRLTGASGRIAEADLPIVLDDGLAGSLVESWLYET..................................... 124
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 9 4 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.