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current user: public |
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Query: PF11919.8; G1XAQ8_ARTOA/1870-1959; Domain of unknown function (DUF3437 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 | |||||||
# | Score | Template | Links and tools | %id | First | TINRHAAVLGLNALVQAFPYVSPPPPWLPEVLTILALRAASDPGMVGESVKTCLSDFKKTRQDTWHIDVKAFTSDQLEDLEGVLWKSYFA | Last |
1 | -67.300 | PF11919.8; G1XAQ8_ARTOA/1870-1959; Domain of unknown function (DUF3437 topsan) | ali | 100 | 1 | TINRHAAVLGLNALVQAFPYVSPPPPWLPEVLTILALRAASDPGMVGESVKTCLSDFKKTRQDTWHIDVKAFTSDQLEDLEGVLWKSYFA | 90 |
2 | -9.870 | PF12755.7; C4QYN7_KOMPG/59-156; Vacuolar 14 Fab1-binding region | ali follow.. | 12 | 2 | ..SRNGGLIGLAATAIALGQHE-VPKYLEKIIHPVLACFGDQDARVRYYACESLYNISKVAKGEILLYFNEIFDNLCKLTAD........ | 80 |
3 | -7.340 | PF18156.1; G2GBG6_9ACTN/18-162; pPIWI_RE three-gene island domain Y | ali follow.. | 20 | 7 | .....TAVLHLAAVDRLDSFTLPYPAGAQRALDALVLQCLRNGAKPPAGVPEMMRWARARPLGSW......................... | 66 |
4 | -6.960 | PF10231.9; APOP1_BOVIN/52-180; Apoptogenic protein 1 | ali follow.. | 11 | 1 | ...................HDWIGPPDKYSNLRPIHFYIPENESPLEQKLRELRQETQEWNQQFWADQNLTFHKEKEEFVRSRLKAK... | 68 |
5 | -6.700 | PF11444.8; Q5P5E0_AROAE/6-206; Protein of unknown function (DUF2895 topsan) | ali follow.. | 16 | 12 | TLRLGSAALFVVALLLGVGWWNAPKSLTIHVPPDLRSGSTRKWWDVPPESVYAFTFYIWQQAQRWPTNGEEDYPRNLNALSAYLTPSCRA | 101 |
6 | -6.630 | PF14462.6; A1VQ26_POLNA/187-308; Prokaryotic E2 family E | ali follow.. | 14 | 47 | ..........LVILPPGYPDVAPDMFFCNLWLTLVSAGRYPTCADQPHTFMGHNWQRWSRHNNSWRPGVDGLHT-MIKRIEHALAEA... | 122 |
7 | -6.440 | PF09645.10; F112_SSV1/3-112; F-112 protein | ali follow.. | 16 | 14 | KILEKKGELTLEDILAQFEISVPSAYNIQRALKAICERHPDECEVQYKNRKTT---FKWIKQEQKEEQKQEQTQDNIAKIFDAQPANF.. | 98 |
8 | -6.330 | PF18623.1; A0A0U4VJU2_9GAMM/383-529; TnsE C-terminal domain | ali follow.. | 7 | 65 | .VDTSDGIKMLSTKVLFGSELQDWIDHFLQIRKGVVAKSISWPNELLDSLFGERNHVGINHPKHQGAEAGNIPLESIE............ | 141 |
9 | -6.150 | PF12719.7; M3XT68_MUSPF/558-858; Nuclear condensing complex subunits, C-term domain | ali follow.. | 21 | 150 | ...RTGAAEGLAKLMFSGLLVS------SRILSRLVLLWYNPVTEEDVRLRHCLGVFFPMFAYASRTNQECFEEAFLPTLQTLAS..... | 225 |
10 | -6.140 | PF13002.7; C5DVA9_ZYGRC/141-332; Arrestin_N terminal like | ali follow.. | 11 | 47 | ..........LPVGNYSFPFSCLISGSFPAKSALGSNSETQIKYELCAVVTYK..................................... | 89 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |