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Query: PF11944.8; Y2971_PHOPR/1-125; Protein of unknown function (DUF3461 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MYPHLTSIGIEQPEAIERYSLRQEAANDILKVYFAKNKGELFAKSVKFKFPRQRKSVLVNSGSREYKEITEINRTLTHIIDELDIITKRKHTEVDIKKKILGDLRHLERVVSHKISEIEADLEKLLast
1 -74.000PF11944.8; Y2971_PHOPR/1-125; Protein of unknown function (DUF3461 topsan)  ali  100  1MYPHLTSIGIEQPEAIERYSLRQEAANDILKVYFAKNKGELFAKSVKFKFPRQRKSVLVNSGSREYKEITEINRTLTHIIDELDIITKRKHTEVDIKKKILGDLRHLERVVSHKISEIEADLEKL 125
2 -8.340PF18126.1; A0A060SJI2_PYCCI/6-169; Mitochondrial ribosomal protein mL59  ali follow..  16  44.................KYSLRQQA--DLVKSARAVGLLHLLPPGPKLSPKEIETASASAPAQATEAGTTEEAKWWTAPVQWQGEYKEKEVKGADVGNRLYAGRKRMERTLEKRTSKRKMLMKDM 155
3 -7.310PF11981.8; E1VNR8_9GAMM/171-458; Domain of unknown function (DUF3482 topsan)  ali follow..  1..NALARLNLHARAVFDTITPPIDGERHLYESL-----ALLLDSKQRPALEQAVSALEKQNGKRRQSAALLVAELLVDCAAARHSV--APEAEEEAEAKLFVQVREREQKCVEALLDL....... 109
4 -6.940PF03730.14; F7E5D3_XENTR/470-557; Ku70/Ku80 C-terminal arm  ali follow..  14  9........................................................................NPVLQQHFRNLEALALDMLEPEPIEDLTLPKVEMIDRRLGTLVEEFKELV... 58
5 -6.900PF14137.6; A6LYB2_CLOB8/32-184; Domain of unknown function (DUF4304 topsan)  ali follow..  1IVPGFKEKGFRKNGK--TFYRKRDGLTEVCNVKFSRDNSR---VHARFWLQVCIAIPSFYDSIGKKYDKKWEATIFNIESDSLIG-FHYPPYMLDLWNSRLIAVSLTETRKDEKEELLKDKLDSR 126
6 -6.800PF06875.11; Q5BNQ4_9SALA/2-215; Plethodontid receptivity factor PRF  ali follow..  39.............SEVQKFAEDIQSSADSLLPTYLSFQGA-LPHIKVVNLPTAAMDYDTFIRQTDETRLKNNLYFYSAIVEFLKEAMTEQEDLNPAELALKAKFEEAMANSNTLISKISDIMTQM 157
7 -6.540PF07795.11; I1M4G8_SOYBN/18-248; Protein of unknown function (DUF1635 topsan)  ali follow..  18  1..................................................................KSMEELRQSLIYTTLELEQTRVAVQEELKKRDEQLLNLKDLLSKTIRERDEAQEKCQRL 59
8 -6.250PF08289.11; M1_I34A1/158-252; Influenza Matrix protein (M1) C-terminal domain  ali follow..  11  37............................................................GSSEQAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKNDLLENLQAYQKRMGVQMQRFK...... 95
9 -6.110PF15219.6; F6UHS6_MONDO/28-123; Testis-expressed 12  ali follow..  17  36.....................................................................KEINLLLTKYAQILSERAAVDASYIEEFDAIFKEASTLENLLKQKRESLRQRFTMI 91
10 -6.090PF01110.17; E1BFH9_BOVIN/1-193; Ciliary neurotrophic factor  ali follow..  15..........DLCSRSIWLARKIRSDLTALVDSYMKHQGLNGNMNLDTLEGVPTASSSRWSELTEAERLQENLQAYRAFHGMLARLLEDQRAHTPAEEDFHQAIHAVLLQVAAFAYQLEELMALL 130

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 2 2 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Slabinski L, Jaroszewski L, Rodrigues AP, Rychlewski L, Wilson IA, Lesley SA, Godzik A. The challenge of protein structure determination--lessons from structuralgenomics. Protein Sci. 2007 Nov;16(11):2472-82.