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Query: PF11981.8; E1VNR8_9GAMM/171-458; Domain of unknown function (DUF3482 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NALARLNLHARAVFDTITPPIDGERHLYESLALLLDSKQRPALEQAVSALEKQNGKRRQSAALLVAELLVDCAAARHSVAPEAEEEAEAKLFVQVREREQKCVEALLDLYAFQADDARLHTLPLSEGRWGDDLFNPETLRALGIRVGSGMAAGALAGAGIDVMAGGLTLGTATAIGALVGGGAQTVRNYGSRLLNKLRGQNELTLSDSVLQVLAVRQGYLLQALAKRTHAATSRIPPPEEADVARSDITDPLQSFFKQARAYPEWSSLNEEHELEGESRDALVGKIASLast
1 -91.100PF11981.8; E1VNR8_9GAMM/171-458; Domain of unknown function (DUF3482 topsan)  ali  100  1NALARLNLHARAVFDTITPPIDGERHLYESLALLLDSKQRPALEQAVSALEKQNGKRRQSAALLVAELLVDCAAARHSVAPEAEEEAEAKLFVQVREREQKCVEALLDLYAFQADDARLHTLPLSEGRWGDDLFNPETLRALGIRVGSGMAAGALAGAGIDVMAGGLTLGTATAIGALVGGGAQTVRNYGSRLLNKLRGQNELTLSDSVLQVLAVRQGYLLQALAKRTHAATSRIPPPEEADVARSDITDPLQSFFKQARAYPEWSSLNEEHELEGESRDALVGKIAS 288
2 -7.300PF11944.8; Y2971_PHOPR/1-125; Protein of unknown function (DUF3461 topsan)  ali follow..  3PHLTSIGIEQPEAIERYSLRQEAANDILKVYGELFAKSVKFKFPRQRKSVLVNSGSREYKEITEINRTLTHIIDELDIIRKHTEVDIKKKILGDLRHLERVVSHKISEI................................................................................................................................................................................... 118
3 -6.900PF05461.11; M3YMB0_MUSPF/26-333; Apolipoprotein L  ali follow..  20  3............................................................RREELDTLLSDQESWERTLSREEAEALREVLNMDMEADEQEARESFLHQFPELKLKLEERIRKLHELADEVDRVHRDCTIANVVANSTGVVSGLLSGLGLAPVTAGASLAL-LATGMGLGVAAT........................................................................................................ 137
4 -6.550PF02466.19; TIM22_CRYNJ/52-172; Tim17/Tim22/Tim23/Pmp24 family  ali follow..  27  89...................................................................................................................................................NGVSAGFLTGAILARNAGPTAMLGGGVAFAAFS............................................................................................................ 121
5 -6.340PF13441.6; A5V8R5_SPHWW/32-78; YMGG-like Gly-zipper  ali follow..  33  2................................................................................................................................................KAGIGAIAGTALGAGAGALVGGRHNRTEAIVGAGIGALAGGA...................................................................................................... 43
6 -6.270PF02653.16; Q98IE3_RHILO/52-351; Branched-chain amino acid transport system / permease component  ali follow..  24  191......................................................................................................................................EANAARNLGVPVARTVMTALAAALFIAVVIGGTLLGYGSAIGAMFGALIFGVVQMGIFYTGIDTDWFKLFMGAMMVIAV........................................................................... 300
7 -6.020PF06897.12; Q92YG4_RHIME/60-159; Protein of unknown function (DUF1269 topsan)  ali follow..  21  1.....................................................................................................................................................AASGSFWGLLVGVLFLNPLIG--VALGAASGAIGGALSDVGINDNFMKELARGLQPGNAALFVLVKEM....................................................................... 66
8 -5.940PF01425.21; AMDS_ASPOR/74-533; Amidase  ali follow..  13  1..............DVTLAFCKRAALAHQLVNCAHDFFPELALAQAREL-----DRYFETHKKPVGPLLPISLKDQLRVKGTETCMAYISWLGKRDTSDSILTALLRKAGAVFLVKTSVPQTLMVCETVNN---------IIGRTSNNLSCGGSSGGEGAMIAMRGGAIGIGTDIGGSIRVPAAFNSLYGIRMTNSMEGQETIHSVVGPIAHSAQDVRLFLQSVLKEEPWKYDSKVIPLPWREAEENAAQAKIAEKSLNFAFYDFDGVVRPHPPITRGVEIVRSTLEK 276
9 -5.880PF05433.15; Q0AB54_ALKEH/32-73; Glycine zipper 2TM domain  ali follow..  24  1...................................................................................................................................................AGAVVGGALGGLLGAQVGGSGRTAAIIAGTLAGAAIG........................................................................................................ 38
10 -5.690PF10607.9; YB83_SCHPO/138-304; CTLH/CRA C-terminal to LisH motif domain  ali follow..  14  1..........................VFTLLKSIVQGIRDKDLKLPIE-WASQCRGYLERKGSSLEYTLQKYRLVSNYLTTKDIMAAIRYCRTNMAEFQKKHLADIQKTMIALFFCSRNEVLSGTNDSHDSLLFVREFCAALGMSLESPLDIVVNAGAIA................................................................................................................................ 162

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.