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Query: PF12273.8; K1X614_MARBU/45-169; Chitin synthesis regulation, resistance to Congo red, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .
# Score Template Links and tools%idFirst RWVALILVVIFFLLMGYLFSITRRRRQRGLAPMYGTGWIPGTGPKPPQGQWADGRNGGPSHYVAPPPPYMGNQATGTTFNSNDGYYGGHANQAGGAGIELQQPQSSYQPQRGGDNVYTAPAGPSPLast
1 -61.600PF12273.8; K1X614_MARBU/45-169; Chitin synthesis regulation, resistance to Congo red  ali  100  1RWVALILVVIFFLLMGYLFSITRRRRQRGLAPMYGTGWIPGTGPKPPQGQWADGRNGGPSHYVAPPPPYMGNQATGTTFNSNDGYYGGHANQAGGAGIELQQPQSSYQPQRGGDNVYTAPAGPSP 125
2 -12.500PF06396.11; ATRAP_HUMAN/9-154; Angiotensin II, type I receptor-associated protein (AGTRAP)  ali follow..  11  78RFGVGMAILSLLLKPLSCCFVYHMYRERGGELLVHTGFLGSSQDRSAYQTIDSAEAPADPFAVPEGRSQ........................................................ 146
3 -12.300PF05454.11; F7EI21_XENTR/596-887; Dystroglycan (Dystrophin-associated glycoprotein 1)  ali follow..  12  153..PAVVVAAILLIAGIIAMICYRKKRKGKLTPIIFADELDDSKPPPSSSMPLILKEEKAPLPPPEYPNQNVPETIPLNQDSLGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPP 287
4 -11.600PF05393.11; ADP_ADE02/1-100; Human adenovirus early E3A glycoprotein  ali follow..  25  43.WFSIALMFVCLIIMWLICCLKRRRAR---PPIYRP......................................................................................... 74
5 -11.500PF07438.11; Q2FYB6_STAA8/1-62; Protein of unknown function (DUF1514 topsan)  ali follow..  20  2.WIVISIVLSIFLLILLSSISHKMKTIEALE.............................................................................................. 31
6 -10.900PF05934.11; CLCC1_RAT/3-541; Mid-1-related chloride channel (MCLC)  ali follow..  8  430.....................FPSGNKSPEVLRAFDLPDTEAQEHPEVVPSHKPSIVNTSLKETSELPRESTLAECSQCAKDGSGQVPSTAESSPIVEKAQLKTDSECRPHSTEAAAAAARGTDP 533
7 -10.700PF15724.5; L5JX75_PTEAL/24-275; TMEM119 family  ali follow..  10  80......LVFLLMFIVCAALITRQKHKASAYYPSSFPKKKYVDQNDRAGGPQAFSEVPDKDPDGRPEEALDSSQQLQADILAATQNLKSPARVASSSGNGARVTEGKSEEEEKGSQEADREAEGRG 198
8 -10.600PF15050.6; F6XC42_HORSE/12-140; SCIMP protein  ali follow..  12  9.WIILAVTIIIV-LSIILYCVCRLLLRQGKK------FEIARPVKQDEEKMYENVTNQSSVQLPPLPPRGLLSSERASPQETPSPPPATYTLVNKLRNKKVNSVPSYVEPEEDYDDVAIPENME. 127
9 -10.500PF05656.14; M4RPR7_9BIFI/58-197; Protein of unknown function (DUF805 topsan)  ali follow..  19  74.WIFAPSVPSILCIVIGLVVMGVGSRQFNAPVFAATG........................................................................................ 109
10 -10.300PF15102.6; TM154_HUMAN/24-165; TMEM154 protein family  ali follow..  8  52EFILMVLLLVLLLLSVVFLATYYKRKRTKQEPSSQGSQSALQTYELGSENVKVPIFEEDTPS............................................................... 117
11 -10.200PF13677.6; D6ZKE5_MOBCV/3-57; Membrane MotB of proton-channel complex MotA/MotB  ali follow..  14  14RWAVITVMMCLFLVLYAISQVDQGKLSK................................................................................................. 46
12 -9.940PF07172.11; Q8W157_BRAOL/1-88; Glycine rich protein family  ali follow..  21  5...ALVLLGLFALLFVIS--VAATSEGQSLKSESEDTLQPDHSGGGGQGYNGGGGYNGRGGYNGGGHHGGGGYNGGGGYNGGGHHGGG..................................... 88
13 -9.940PF15106.6; G3QN96_GORGO/39-264; TMEM156 protein family  ali follow..  22  178.WYILVLLVFIIILTIRKILEGHRRVQKWQSHRDKP......................................................................................... 214
14 -9.840PF14575.6; H2MRL1_ORYLA/545-640; Ephrin type-A receptor 2 transmembrane domain  ali follow..  17  4..SAAAGLVFLIALVVIIIVCNRRRGFDRHDSEYTDKLQHTVGDWSYLRSPSLGSKVERFHPVLQVTPGMKIYIDPFTYEDPNE......................................... 85
15 -9.710PF02950.17; CO16A_CONPL/1-79; Conotoxin  ali follow..  10  3..LTCVMIVAVLFLTAWTFVTADSIRALEDLFAKAPDEMENSGASPLNERDCRPVGQ.................................................................... 57
16 -9.520PF15763.5; J9NSA7_CANLF/7-170; Regulator of human erythroid cell expansion (RHEX)  ali follow..  14  3.WHGLVIAVVSFILQACLFTACRNMAKKSERILKGARLQAPGPGPAHRQPLAAQEETRSTPVSEPHYRHGSDTSSDSSNSSDNSDSSPQNCQATKD............................. 102
17 -9.220PF12575.8; Q6TUW9_YMTV5/1-70; Poxvirus entry protein complex L1 and I2  ali follow..  19  49.WIITIIFVVLAVFLTFLYLKA....................................................................................................... 69
18 -9.210PF17359.2; A0A0C5S2P0_9MOLU/14-235; Family of unknown function (DUF5385 topsan)  ali follow..  29  5..FLTILIIIIPIILIIVFIVRKKRRQNGDGPSTGN......................................................................................... 38
19 -9.150PF01456.17; Q9NIQ2_TRYCR/1-128; Mucin-like glycoprotein  ali follow..  8  1...MLRPVLCVLFFALCCACVCATAQEEGQ---YDAADVEAGDGPDKTTTTTTTTTTTTTTTTTTTTTNAPAKSTTTTNAPAKSTTTTNAPAKNTTASKAPTPGDGSS................. 102
20 -9.140PF06541.11; E3GF10_EUBLK/32-189; Putative ABC-transporter type IV  ali follow..  27  1.WIFMIGCFLGTILEMIFCFVTQHGSRSGL-PVYGFG........................................................................................ 44
21 -9.060PF01848.16; HOKD_ECOLI/6-47; Hok/gef family  ali follow..  14  2..MLIALIVICLTVIVTALVTRKDRIRTGQTEVAVF......................................................................................... 39
22 -9.060PF07543.12; G9NFF0_HYPAI/33-160; Protein trafficking PGA2  ali follow..  10  14GWLRLIMVVCTYLLIRPHIIKYSTKHAVKKL--------EEQDVKDKKFAEDQVAKMSPNDLRGLGAVEEEDVDADEGADGSKANWGSKARVRQRKTLRKILEAEEQRRYEEESD.......... 120
23 -9.020PF02101.15; W5K1T9_ASTMX/5-409; Ocular albinism type 1 protein  ali follow..  7  294.WFIMGILMQAFLNTLAFHGWTGLDVDLSLQPRRELAWDSASTSLVTAGGYNTMVASTLLYQSHVQEGKKLAGNGHHQASDAASVLSEGSESSTIEIHISSELRDGEEVDA.............. 405
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60.