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Query: PF12506.8; Y436_MYCPN/715-833; Protein of unknown function (DUF3713 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst KLNNYFTFLITKTLWPKVGQEETSISEESNKLKTKTADVDKIRDKILENIQTKVNDFVKNKLKPALAPRPAYSNVILLNVNNDKVLSSGANWSLASLLQSDKVNPLSFMLLKQAFDNNDLast
1 -90.400PF12506.8; Y436_MYCPN/715-833; Protein of unknown function (DUF3713 topsan)  ali  100  1KLNNYFTFLITKTLWPKVGQEETSISEESNKLKTKTADVDKIRDKILENIQTKVNDFVKNKLKPALAPRPAYSNVILLNVNNDKVLSSGANWSLASLLQSDKVNPLSFMLLKQAFDNND 119
2 -6.210PF06426.14; G2IV90_PSEUL/9-113; Serine acetyltransferase, N-terminal  ali follow..  13  1.............IWLAVFKEAEAAAQAEPLLAS-------LHMTVLRTLEDVLAFHLSSKLSSPVMDARALMELFREALAADPVIGQKMRADIVACYDRD.................. 84
3 -6.200PF02607.17; Q487C0_COLP3/660-734; B12 binding domain  ali follow..  10  2......................................NARLSHALVKGINEFIIEDTEEARLASEKPLDVIEGPLMDGMNTVGDLFGAGEMFLPQVVKSARVMKQAVAYLN....... 75
4 -5.870PF04120.12; C3KLM8_SINFN/5-129; Low affinity iron permease  ali follow..  19  18....FVIAVATIALWGITGPFFGFSETWQLIINTGTTIVTFLMVFVLQNSQNRDGTALQAKLDELILTSEAENRFIGIEKLDDRELKR............................... 101
5 -5.800PF06541.11; E3GF10_EUBLK/32-189; Putative ABC-transporter type IV  ali follow..  17  24GLIESRSGLIYGPFNPVYGFGAVVLTIVLRPLAHKRDLIIFLFSMVIGSGFEYLCSAFQQYFMGTVS---DYSNL--LNIGGRTCLLYGLFWGLLGLLWVKDIYPYFSKWIEKI..... 134
6 -5.730PF15503.6; G7YTJ7_CLOSI/3-153; Protein phosphatase 1 regulatory subunit 35 C-terminus  ali follow..  10  5......................AELSFDHLHFQEPCERARKEAARLVEEACAGSSQSNAESLLLTPGDVCTFNNLMELTVDESEIVRLERE............................ 80
7 -5.520PF05639.11; R4LNJ3_9ACTN/4-71; Pup-like protein  ali follow..  23  27.........................PEVAERHAEITEDVDDLLDEIDSVLEENAEEFVRGYVQ........................................................ 64
8 -5.490PF06232.11; Q9LVB5_ARATH/27-152; Embryo-specific protein 3, (ATS3)  ali follow..  8  21................TTSCFSPDWSRDQVTIALGDADDNQVVAPRLDKPLSGGGGFEKCSSDTFQVKGKCLNTICSVYIYRS----GTDGWIPETVIYKEGSKSVKFDF......... 111
9 -5.370PF07030.12; Q8EIZ8_SHEON/6-130; Protein of unknown function (DUF1320 topsan)  ali follow..  8  1.......YATPDNMLSRFGEQDLTLLTEREDSVPGEINLALL-EQALSDASAEIDGYIAGRYVLPLTTVPAVLERNCCDI....................................... 72
10 -5.290PF15318.6; E1BK21_BOVIN/1-193; Putative Bcl-2 like protein of testis  ali follow..  13  1.............MGNNSSHKRTKVPKQARKEKPPDMDKARRKRQFFNHLKWKKPSVSPDRTRVGEGPRETGGRVLLFPLDKRQQLAEAT--ASEAAADTPTGPPATAPMLRGAGDGAE 116
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.