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current user: public |
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Query: PF12706.7; I3ZD26_TERRK/61-263; Beta-lactamase superfamily domain, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . | |||||||
# | Score | Template | Links and tools | %id | First | RNLLVDPVFERLVLLRRQRPGILIDHLPPVDAVLLTHAHMDHLNLPSLRKRHATKLTVIVPKGVADLVENLGFRSVTELEWWQTTALADEPVSITMTPARHWGARMFKDTHRQFGGYVIAGAGHSVYHSGDTAYFGHEIGQRLQPQIALLPIGAYFPDSYRAVHTSPEEALQAFLDLGATTMVPMHY | Last |
1 | -107.000 | PF12706.7; I3ZD26_TERRK/61-263; Beta-lactamase superfamily domain | ali | 100 | 1 | RNLLVDPVFERLVLLRRQRPGILIDHLPPVDAVLLTHAHMDHLNLPSLRKRHATKLTVIVPKGVADLVENLGFRSVTELEWWQTTALADEPVSITMTPARHWGARMFKDTHRQFGGYVIAGAGHSVYHSGDTAYFGHEIGQRLQPQIALLPIGAYFPDSYRAVHTSPEEALQAFLDLGATTMVPMHY | 187 |
2 | -37.300 | PF13483.6; B9JRY8_AGRVS/77-244; Beta-lactamase superfamily domain | ali follow.. | 11 | 17 | GLTIDTDYSGYLRSA------------RTPDVVTMNKAHSSHYTLSPDPGIAQVLHGWND--------------AQPGEPVHHNLVV--GDAYIRNVATDIRSWGGDFEPNG-NSIFIFEVAGLCIGHLGHLHHTDKQFAAIGRLDVVMVPVDGGL-------TLGSDSMSRMVKRLRSALILPMH. | 168 |
3 | -15.800 | PF16661.5; G0VCW5_NAUCC/19-212; Metallo-beta-lactamase superfamily domain | ali follow.. | 11 | 7 | VTILIDPGWTSTEVSYVDCVKYWSNLIPEIDVILISQPTIECLGYENFLSHFLSRIAVYATLPVANLGREAAFDHIQILKYSQMIDLRSDGLTFFALNSGVNPGGSI---------WCISTYSEKLVYAPRWNH..................................................... | 165 |
4 | -12.300 | PF00753.27; PDLA_RHILO/30-244; Metallo-beta-lactamase superfamily | ali follow.. | 13 | 16 | GRFLIDTGYDQTIPGALGLLGLEPRD---IDVVVNSHFHFDHFPHAKKICHRSEVPQACNPQPFEHLLLEGTTRANSTFEGIDGDVDLARGVKLISTPG-HSIGHYSL--------LVEFPRRKPILFTIDAAYTQKSL----------------ETLCQAAFHIDPVAGVNSMRKVKK........ | 210 |
5 | -9.830 | PF17030.5; I3EIZ1_NEMP3/1-217; Putative beta-lactamase-like family | ali follow.. | 11 | 25 | TSLLFD--LCGISDRGYIEIEVIKEYPPDITGIFITNSNSLSVFFVESDVYLTDYIYLQMKERLKYYVSKEISRRVKIIRHNQVINF--TYLSITAQAAGLSLG---------WIMYAVAQDKEKCAYAYGIPG..................................................... | 182 |
6 | -8.680 | PF02112.15; Q5AGE4_CANAL/35-421; cAMP phosphodiesterases class-II | ali follow.. | 12 | 76 | ........................NIFNNLQNYLISHSHLDHVSVVINSAGFNKNMSNKILYGSHYTINAMQQHLFNGKVW-SNRSERIGIYTVKMFDLSHGEFNKLTEDKE--SAFLIKEPPSSILVFGDFESDLTSKLSRN--QLKAIVLECSNCKEIAANHLTPKLLIYELKQLAH........ | 318 |
7 | -8.650 | PF14597.6; K9Q9I8_9NOSO/1-199; Metallo-beta-lactamase superfamily | ali follow.. | 14 | 33 | GNILIDPVALSNHDWN------HLESLGGVDWIILTNSEH----IRAAKEIAVQYAKVAGPAAEKECFPIACDRWLSDGD--------VSGLTTIELQGSKTPGE------------LALLLEETTLITGDL....................................................... | 137 |
8 | -8.430 | PF09569.10; E6SPG6_BACT6/3-192; ScaI restriction endonuclease | ali follow.. | 12 | 1 | .....SPYNGLNVEDWKSKTEELIKAHPLKEKIVIVLKAWDDIFNSQMGSFKIGKDIFPSPQIMSFFLHELVAHYLSLEEYKVGEAKKEKDVHNIINPQMGIEIKASSHPTQIFANRSYAQPSSSSEEKDKNGYYIGINFEKFKPQILQIRFGYLEHSDWIAQKAATGQQARLSTNADKNKLITIY. | 190 |
9 | -8.380 | PF07024.13; B9K2G2_AGRVS/143-263; ImpE protein | ali follow.. | 12 | 11 | ........................................DDRIPHALEVLTTGGAYLWVDFSRIASVTPQPIRRPRDTAFRPELTLESGAEATVLLPAIY-SPALQLGHETEWVDGIVTGLGQRCLLAGDELVSFHDLES.............................................. | 119 |
10 | -6.680 | PF13242.6; A0A1C4J1N8_9ACTN/183-255; HAD-hyrolase-like | ali follow.. | 18 | 15 | ......................................................................................................................IGAHSESSAMIGDRMDTDVLAGLEAGMETFLVLTGLTAVPDIDKYPFRPTEVVDSIADL.......... | 73 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Bossy-Wetzel E, Barsoum MJ, Godzik A., Schwarzenbacher R, Lipton SA. Mitochondrial fission in apoptosis, neurodegeneration and aging. Curr Opin Cell Biol. 2003 Dec;15(6):706-16. Review. |