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Query: PF12706.7; I3ZD26_TERRK/61-263; Beta-lactamase superfamily domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RNLLVDPVFERLVLLRRQRPGILIDHLPPVDAVLLTHAHMDHLNLPSLRKRHATKLTVIVPKGVADLVENLGFRSVTELEWWQTTALADEPVSITMTPARHWGARMFKDTHRQFGGYVIAGAGHSVYHSGDTAYFGHEIGQRLQPQIALLPIGAYFPDSYRAVHTSPEEALQAFLDLGATTMVPMHYLast
1 -107.000PF12706.7; I3ZD26_TERRK/61-263; Beta-lactamase superfamily domain  ali  100  1RNLLVDPVFERLVLLRRQRPGILIDHLPPVDAVLLTHAHMDHLNLPSLRKRHATKLTVIVPKGVADLVENLGFRSVTELEWWQTTALADEPVSITMTPARHWGARMFKDTHRQFGGYVIAGAGHSVYHSGDTAYFGHEIGQRLQPQIALLPIGAYFPDSYRAVHTSPEEALQAFLDLGATTMVPMHY 187
2 -37.300PF13483.6; B9JRY8_AGRVS/77-244; Beta-lactamase superfamily domain  ali follow..  11  17GLTIDTDYSGYLRSA------------RTPDVVTMNKAHSSHYTLSPDPGIAQVLHGWND--------------AQPGEPVHHNLVV--GDAYIRNVATDIRSWGGDFEPNG-NSIFIFEVAGLCIGHLGHLHHTDKQFAAIGRLDVVMVPVDGGL-------TLGSDSMSRMVKRLRSALILPMH. 168
3 -15.800PF16661.5; G0VCW5_NAUCC/19-212; Metallo-beta-lactamase superfamily domain  ali follow..  11  7VTILIDPGWTSTEVSYVDCVKYWSNLIPEIDVILISQPTIECLGYENFLSHFLSRIAVYATLPVANLGREAAFDHIQILKYSQMIDLRSDGLTFFALNSGVNPGGSI---------WCISTYSEKLVYAPRWNH..................................................... 165
4 -12.300PF00753.27; PDLA_RHILO/30-244; Metallo-beta-lactamase superfamily  ali follow..  13  16GRFLIDTGYDQTIPGALGLLGLEPRD---IDVVVNSHFHFDHFPHAKKICHRSEVPQACNPQPFEHLLLEGTTRANSTFEGIDGDVDLARGVKLISTPG-HSIGHYSL--------LVEFPRRKPILFTIDAAYTQKSL----------------ETLCQAAFHIDPVAGVNSMRKVKK........ 210
5 -9.830PF17030.5; I3EIZ1_NEMP3/1-217; Putative beta-lactamase-like family  ali follow..  11  25TSLLFD--LCGISDRGYIEIEVIKEYPPDITGIFITNSNSLSVFFVESDVYLTDYIYLQMKERLKYYVSKEISRRVKIIRHNQVINF--TYLSITAQAAGLSLG---------WIMYAVAQDKEKCAYAYGIPG..................................................... 182
6 -8.680PF02112.15; Q5AGE4_CANAL/35-421; cAMP phosphodiesterases class-II  ali follow..  12  76........................NIFNNLQNYLISHSHLDHVSVVINSAGFNKNMSNKILYGSHYTINAMQQHLFNGKVW-SNRSERIGIYTVKMFDLSHGEFNKLTEDKE--SAFLIKEPPSSILVFGDFESDLTSKLSRN--QLKAIVLECSNCKEIAANHLTPKLLIYELKQLAH........ 318
7 -8.650PF14597.6; K9Q9I8_9NOSO/1-199; Metallo-beta-lactamase superfamily  ali follow..  14  33GNILIDPVALSNHDWN------HLESLGGVDWIILTNSEH----IRAAKEIAVQYAKVAGPAAEKECFPIACDRWLSDGD--------VSGLTTIELQGSKTPGE------------LALLLEETTLITGDL....................................................... 137
8 -8.430PF09569.10; E6SPG6_BACT6/3-192; ScaI restriction endonuclease  ali follow..  12  1.....SPYNGLNVEDWKSKTEELIKAHPLKEKIVIVLKAWDDIFNSQMGSFKIGKDIFPSPQIMSFFLHELVAHYLSLEEYKVGEAKKEKDVHNIINPQMGIEIKASSHPTQIFANRSYAQPSSSSEEKDKNGYYIGINFEKFKPQILQIRFGYLEHSDWIAQKAATGQQARLSTNADKNKLITIY. 190
9 -8.380PF07024.13; B9K2G2_AGRVS/143-263; ImpE protein  ali follow..  12  11........................................DDRIPHALEVLTTGGAYLWVDFSRIASVTPQPIRRPRDTAFRPELTLESGAEATVLLPAIY-SPALQLGHETEWVDGIVTGLGQRCLLAGDELVSFHDLES.............................................. 119
10 -6.680PF13242.6; A0A1C4J1N8_9ACTN/183-255; HAD-hyrolase-like  ali follow..  18  15......................................................................................................................IGAHSESSAMIGDRMDTDVLAGLEAGMETFLVLTGLTAVPDIDKYPFRPTEVVDSIADL.......... 73

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24