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Query: PF12762.7; Q3SWJ2_NITWN/132-286; ISXO2-like transposase domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PLGGEGKIVEADETYFGKADTQRVSPQRKGRTFTKNRKIKNDRPIVSLVERGGNVRSFHVAVADSSTVACIVNANVHKESRLQTDESRLYTKVGADFAAHETVNHGAKEYARGDVTTNTIESYFSVFKRGMRGTYQHCSEKHLHRYLAEFDFRYNLast
1 -101.000PF12762.7; Q3SWJ2_NITWN/132-286; ISXO2-like transposase domain  ali  100  1PLGGEGKIVEADETYFGKADTQRVSPQRKGRTFTKNRKIKNDRPIVSLVERGGNVRSFHVAVADSSTVACIVNANVHKESRLQTDESRLYTKVGADFAAHETVNHGAKEYARGDVTTNTIESYFSVFKRGMRGTYQHCSEKHLHRYLAEFDFRYN 155
2 -17.700PF03400.13; Q32H87_SHIDS/20-150; IS1 transposase  ali follow..  14  4.......CAEMDEGYVGAK--------------------SRQRWLFYAYDRLRKVVAHVFGERTMATLGRLMSLLSPFDVIWMTDGWPLYESR------------KGKLHVISKRYTQRIERHNLNLRQHLARLGRKSSVELHDKVIGHYLNIKH 129
3 -13.400PF13358.6; D3VKI2_XENNA/117-263; DDE superfamily endonuclease  ali follow..  10  2.......LLFRDAVPPSPSTKLSAGGMKAGKNQVETTGSRTRLNLMGALNLQQIEETVIRPTINAKNVVLFFGAIRETKIHLILDGAGYHRSEIVKFFAEVL-NIELHYLPPYSPNLNPIERLWKYANEQIRNNVYFPDAKTFR........... 147
4 -10.400PF01609.21; TRA2_ECOLX/112-294; Transposase DDE domain  ali follow..  11  2...GEIAHLVIDSTGLKVFGEGEWKVKKHGQERRR----IWRKLHLAVDSKTHEIICADLSLNDSEAFPGLIRQTHRKIRAASAD--GAYDT-RAVANQRMTGSNARWKWTTDYNRRSIAETAMYRVKQLF----GSLTLRDYDGQVAEAMALLN 182
5 -8.490PF13610.6; Q6LW75_PHOPR/74-213; DDE domain  ali follow..  14  4.........QLDETYV--------------------KVKGKWHYLYRAINKQGETLDFYFHKRNKEAAYQFLRRCLRY-KTLNTDKHSSYANAIARLKKEGRLRADVEQRQVKYLN-NGIESDHAPIKKLVVATGGFKIRKRAWSTIQGFESFRM 135
6 -6.960PF14638.6; W5MN43_LEPOC/866-1049; Folliculin-interacting protein C-terminus  ali follow..  15  34............................................VLHGASSDERLKQCLMADLDHAVVHPALDEPIAEAVCIVADTDKWTVQVATSQRRVVDSNKLGKDVLVSSLVSNLLHSMLQLSKLNLSPTF-----MHLEDRLQEVYFK.. 139
7 -6.620PF01610.17; A4XPD4_PSEMY/163-420; Transposase  ali follow..  4  1........LGVDEHVWRHTRCGDK-------------------LTPVRNKNGPARLLDVLEGRSKQAFKQWLQSRPKSWESIAMDGFTGFKSAAQEALPQAQT---------DPFHVRWASNMLDECRRRVQHDILGRRGRK............. 120
8 -6.420PF13612.6; Q7M788_PHOLL/104-258; Transposase DDE domain  ali follow..  12  2..GKPTKIAFIDSTSL----HNIRIPRHKVFKGIAQRGKTSMGWFYGVVNHQGEILALKVTPGNVNDREPVRELSKSLTGYLYGDKGYLSQELADDLAKIGVTFITKKRRNMKAQALSEWNNLMLKKRFIIETINGQLKTIS............. 145
9 -6.340PF13333.6; Q5F880_NEIG1/215-270; Integrase core domain  ali follow..  28  1........................................................................................................................ESFFGTLKSECFHTCKYDSVTESEAALHEYIRYYN 35
10 -5.880PF08683.11; G3HWW5_CRIGR/80-198; Microtubule-binding calmodulin-regulated spectrin-associated  ali follow..  9  2.....................................................RLYKEPSAKSNKFIIHNALSHCCLAGKVNEPQKNRILEEIEKSKANHFLILFRDSSCQFRALYTLSGET-------EELSRLAGYGPRTVTPAMVEGIYKYN 96
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;