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current user: public |
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Query: PF12804.7; Q5FTR9_GLUOX/6-165; MobA-like NTP transferase domain, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 | |||||||
# | Score | Template | Links and tools | %id | First | GLILAGGASRRMGTDKAALDYHGKPQLQAAFEVLTPVVEQCFVSVRPGQTSDPLRSSFPQIVDTVDVDGPAAGLLSAHRAYPDVAWLVLACDLPMLDRGTLDTLIAARDGEHVAVSYRSEHDGLPEPLCAIWEPEALERLEKQVAGGRICPRKLLINSPT | Last |
1 | -85.500 | PF12804.7; Q5FTR9_GLUOX/6-165; MobA-like NTP transferase domain | ali | 100 | 1 | GLILAGGASRRMGTDKAALDYHGKPQLQAAFEVLTPVVEQCFVSVRPGQTSDPLRSSFPQIVDTVDVDGPAAGLLSAHRAYPDVAWLVLACDLPMLDRGTLDTLIAARDGEHVAVSYRSEHDGLPEPLCAIWEPEALERLEKQVAGGRICPRKLLINSPT | 160 |
2 | -16.400 | PF01128.19; ISPD_ECOLI/8-229; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | ali follow.. | 22 | 3 | AVVPAAGFGRRMQTEKQYLSIGNQTILEHSVHALLPRVKRVVIAISPGDSRQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLV----PCLHQDDLARLLALSETSRTGGILAAPVRDTMK.................................. | 135 |
3 | -11.600 | PF02348.19; NEUA_MOUSE/44-298; Cytidylyltransferase | ali follow.. | 16 | 2 | ALVLARGGSKGI-PLKNIKRLAGVPLIGWVLRAAAGVFQSVWVSTDHDEIENVAKQSSETSKDSSTSLDAIVEFLNYHNEV--DIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVF........................................... | 125 |
4 | -10.400 | PF00483.23; GLGC_SYNY3/15-285; Nucleotidyl transferase | ali follow.. | 15 | 2 | AIILGGGAGTRLLRAKPAVPLAGKYLIDIPVSNCINSIVKIYVLTQSASLNRHISRAYNTKDNPDWFQGTADAVRQYFREWDVDEYLILSGDH-LYRMDYAQFVKRHRETNADITLSVVPVDDRKAPELGLMKIDAQGRITDFSEK.............. | 174 |
5 | -8.990 | PF01704.18; E6ZRZ1_SPORE/65-474; UTP--glucose-1-phosphate uridylyltransferase | ali follow.. | 15 | 55 | .LKLNGGLGTTMGCTKSVIEVEGMTFLDLSVRQIEHLNSSHNVNVP-------------ILMNSFNTDDDTARVIQKYANHNVEILTFNQSRYPRVNKESLLPCPRSATDNKNLWY-----PGHGDLFDAMNNSGLLDRLIA.................. | 182 |
6 | -8.180 | PF01983.16; COFC_ARCFU/1-205; Guanylyl transferase CofC like | ali follow.. | 13 | 3 | .ILIANNPKSRLSEERKELA---RLMLLDVIDAAKPFGEIKVVCPSELDVEGVEVVV--------------SDLNTTVNKVDEAPLAVIMSDLPLLSEEVLKRFFETEGD.................................................. | 105 |
7 | -7.170 | PF07507.11; A1TYQ9_MARHV/15-321; WavE lipopolysaccharide synthesis | ali follow.. | 13 | 2 | SVVVQGPVQSFQDREQE------PGITQKCLESVRRHLSTLILSTWPGQELAGLDFDRLVISDDPGSN-QIVSTREGLKEVTTKYAVKLRSDNYLTGNNFVALQRAYPKRTSTHCFLKER--GLTEDLKALWDLALFDD..................... | 177 |
8 | -6.930 | PF06258.11; Q9A4I2_CAUVC/24-333; Mitochondrial fission ELM1 | ali follow.. | 10 | 155 | .AVLVGGKSKAFDLSSERA----AQIAHSIQIPLEQDGGSLLMTFSRRTPETARALHLPGVVWNGEGPNPYFAFLA-------------AADYILVTEDSTNMATEAASTGKPVFVLKMDSLKFRLFHEELERQGAARPYGGAFHGWTYTPVNETDRA.. | 302 |
9 | -6.360 | PF09837.9; Q7NI73_GLOVI/42-153; Uncharacterized protein conserved in bacteria (DUF2064 topsan) | ali follow.. | 12 | 36 | .................................................................QQGADLGERLLHAFEAVGTPAVGIGSDSPHLDSEIYRVAAERLEQVPVVI............................................. | 85 |
10 | -6.220 | PF08843.11; B4SCH8_PELPB/39-286; Nucleotidyl transferase AbiEii toxin, Type IV TA system | ali follow.. | 12 | 13 | .LAFGGGTSKRFSEDVDFKTPAGHKYYRETRKKIIAALEDGGLVLVAKPMVRDGSRFFSLELDYGATFMRNQRLRTHIRVEVRFVAPQMPVVFKPVQSLLRFTE--GQPAEIGSMPYIDPVEIAADKLSALSWRL----LDEEERQDKTLIRHVHD.... | 171 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |