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Query: PF12910.7; A5CZB2_PELTS/1-145; Antitoxin of toxin-antitoxin, RelE / RelB, TA system, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .
# Score Template Links and tools%idFirst MLQVNSISQARTEFQKLFKQAVLHNREFLTENAKETTSGETVSIIRTKLLDEWLDRAYTFNPVWEYDEENKLWSVTLPEIRVYTDAPTKEEAAEQLVDLVLDYCEDYFNRLDLFTALPDRRGHYPYLRRIARCRDAAQVKEVLNLLast
1 -76.100PF12910.7; A5CZB2_PELTS/1-145; Antitoxin of toxin-antitoxin, RelE / RelB, TA system  ali  100  1MLQVNSISQARTEFQKLFKQAVLHNREFLTENAKETTSGETVSIIRTKLLDEWLDRAYTFNPVWEYDEENKLWSVTLPEIRVYTDAPTKEEAAEQLVDLVLDYCEDYFNRLDLFTALPDRRGHYPYLRRIARCRDAAQVKEVLNL 145
2 -13.600PF15970.5; B4EVM4_PROMH/3-83; HicB_like antitoxin of bacterial toxin-antitoxin system  ali follow..  15  1..........................................................NYPATSHFDEESETYEITYRDFDIHAVAYTEDDIELEASDILHVGLEEFISS................................... 53
3 -13.200PF08972.11; A0ZK26_NODSP/6-80; Domain of unknown function (DUF1902 topsan)  ali follow..  20  1..........................................................TIKVQAFWDAEASVWVADASNLPLVTEAETIEQLTKKLEMMIPELMEL....................................... 49
4 -13.100PF15919.5; E1VAV2_HALED/3-129; HicB_like antitoxin of bacterial toxin-antitoxin system  ali follow..  17  1...........................................................YPIAIEIADEQHAYSVVVPDLPCFSAGDTFDEAVANAREAIEGHLESLSDH................................... 52
5 -7.090PF02604.19; Q3A3M7_PELCD/5-78; Antitoxin Phd_YefM, type II toxin-antitoxin system  ali follow..  2..SVKPITYFKAHSAEVLGHLDQDGNALVITQNGE.............................................................................................................. 34
6 -6.320PF11265.8; T1HXT8_RHOPR/7-220; Mediator complex subunit 25 von Willebrand factor type A  ali follow..  6.ADVIFIIEGTAINGAYLNDIKTNYIIPTLEYFNQGNLEERDYVCESTSALYGIVLPSPSTDIYGPYSNPHKVLQMLDKIELVGGRGESHANVAEGLASSLICLDDLQQRREPGLAPQRH......................... 131
7 -6.180PF18493.1; W0BH84_9GAMM/296-385; Domain of unknown function (DUF5617 topsan)  ali follow..  18  9......................................................................................QTSKDPLQSARALLNDYTKG--SWWLRFFTGHWNRHHIQEVAQIVKKMDDGIIKDKHSL 66
8 -6.040PF18460.1; W6FLV3_NODSP/200-278; Heterocyst differentiation regulator C-terminal Hood domain  ali follow..  21  25...................................................................ERRPNTMRALEELDI--PAEKWEQAMAELDEIVREWADRYHQS................................... 65
9 -5.610PF12570.8; Q82TF1_NITEU/48-180; Protein of unknown function (DUF3750 topsan)  ali follow..  15  51.............................................................VAIHEQAPDKRWFGNAPMLLAEKRGEGVDELIKRIDKTVQTY--PYSKEYTIW-PGPNSNTFTAWLSR................ 115
10 -5.340PF09236.10; H2NS04_PONAB/5-91; Alpha-haemoglobin stabilising protein  ali follow..  34...............................................................VTVVEDWMNFYINYYRQQVTGEPQERDKALQELRQELNTLANPFLAKYRDFLKS............................ 87

FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Jaroszewski L, Li W, Godzik A. A segment alignment approach to protein comparison. Bioinformatics. 2003 Apr 12;19(6):742-9.