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Query: PF13053.6; Q81Q33_BACAN/1-89; Protein of unknown function (DUF3914 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst MQIGSNIHTLSQPTKITPSNLEHNTISSTKLESKKVNDPIKFDIRSSEKEMKQPEHKFNELDLWKMLKDKGVPLWIILEMLQKVRKEKELast
1 -79.600PF13053.6; Q81Q33_BACAN/1-89; Protein of unknown function (DUF3914 topsan)  ali  100  1MQIGSNIHTLSQPTKITPSNLEHNTISSTKLESKKVNDPIKFDIRSSEKEMKQPEHKFNELDLWKMLKDKGVPLWIILEMLQKVRKEKE 89
2 -7.410PF01648.20; A3I0U0_9BACT/106-207; 4`-phosphopantetheinyl transferase superfamily  ali follow..  18  1......................................PVGIDMDFIREKILRIGFRFSELDFLEKDPLHYTLAWSAKESIFKCQGRR. 53
3 -7.190PF01456.17; Q9NIQ2_TRYCR/1-128; Mucin-like glycoprotein  ali follow..  20  45........TTTTTTTTTTTTTTTTTTNAPAKSTTTTNAPAKSTTTTNAPAKNTTASKAPTPGDGSSL---GGPLWVQVPLL........ 114
4 -7.130PF03771.16; F2R998_STRVP/39-107; Domain of unknown function (DUF317 topsan)  ali follow..  11  9..............................AEWVRGSHDFLLGDLQVAWHVSARQHPSSAVMEWTACFTTGTPPEAIADFLLAIEARTD 67
5 -6.390PF16978.5; I4Y5L5_WALMC/410-562; SAPK-interacting protein 1 (Sin1), middle CRIM domain  ali follow..  10  80..............LFVEQREKDSKEMLGNNTDDIKWTPEGWNLRIVEED--EVDEDFPALDRLRPVSKFSFDELAICEATAAQVRSNQ 153
6 -6.370PF03189.13; X1X228_ACYPI/189-632; Otopetrin  ali follow..  15  350LVLITASASLVQQTVFILDASRRSCVTPDQIRKKPGREIVTFTLEKSRADSHPIQLHFYGLWAWTIITHVSMPLAIFYRF......... 444
7 -6.370PF09167.11; L0IZ30_9MYCO/38-162; Domain of unknown function (DUF1942 topsan)  ali follow..  44WEASATDTAIRGTVTPIIPDMNSRAANGDNYRGGSTTGKLYFDVTATDPNSVVYNDGVQDLLIW......................... 125
8 -6.300PF12590.8; F6HH54_VITVI/1-128; Acyl-ATP thioesterase  ali follow..  18  40..........SRNAPSGSLQVKANAQAPPKINGTTVGYTSSAEGVKIEDDMSSPPPRINQLPDWSMLLAAITTIFLAAE.......... 110
9 -6.080PF16028.5; H9J6C6_BOMMO/80-156; Solute carrier family 3 member 2 N-terminus  ali follow..  20  1.............................................DAKIELDANKRQFTGMTREEVLKYADDPFWVNLR.......... 34
10 -5.650PF10963.8; B8J329_DESDA/5-85; Phage tail assembly chaperone  ali follow..  15  7..........GKILRFDMTPEIYNKYINELTANKKVAPTQNMLMRAVHDEDKD--------TLKEFSAMPGAVFEIAAMLVEEYAPELT 77

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Jaroszewski L, Bierzynski A, Godzik A. Multiple model approach--dealing with alignment ambiguities in protein modeling. Pac Symp Biocomput. 1997;:328-39.