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current user: public |
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Query: PF13241.6; Q2FTK6_METHJ/4-113; Putative NAD(P)-binding, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 | |||||||
# | Score | Template | Links and tools | %id | First | LMIDFTGKKVIIFGGGVIGARKARYFAYEADVLVYSRSFHPEFQEIPVRTEVCNLTGDLEILRNMIHDASLVIAATSDPELNELIESACAREHIWCNVAAGKRGDVVLPA | Last |
1 | -63.700 | PF13241.6; Q2FTK6_METHJ/4-113; Putative NAD(P)-binding | ali | 100 | 1 | LMIDFTGKKVIIFGGGVIGARKARYFAYEADVLVYSRSFHPEFQEIPVRTEVCNLTGDLEILRNMIHDASLVIAATSDPELNELIESACAREHIWCNVAAGKRGDVVLPA | 110 |
2 | -13.000 | PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain | ali follow.. | 15 | 19 | ..VMIAGKVAVVAGYGDVGKGCAQSLSKGARVLVTEIDPINALQACMDGYQIV------TMETAAPLSNIFVTTTGCRDIVRGEHFAVMKEDAIVCNIGHFD........ | 113 |
3 | -10.400 | PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase | ali follow.. | 11 | 6 | IFSDLHRSQALLIGAGETITLVARLFEQGVKRIVVANRTLERASLLAEQ--FGAHAVLLSEIPEELANSDIVISSTASQLVERALKQRKHKPMFMVDIAVPRDIE..... | 116 |
4 | -9.950 | PF06690.11; D7DUD4_METV3/2-259; Protein of unknown function (DUF1188 topsan) | ali follow.. | 13 | 38 | ...GEEFEQAIIFGAYLSGNYIANTLADCGEVILI--DSQPHLEDIVTGNGIKFMDLNTFNNKDKEINPDLIIDVTGLGGVDPNMLKDFDPKVLIIEDPKSSFDKELMEA | 148 |
5 | -9.710 | PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase | ali follow.. | 16 | 254 | ....MAGKIAVVCGYGDVGKGCAQSLRGGARVIITEIDPICALQAAMEGYEVKTLDEVVS------YADIFVTTTGNTGIISAAQMEKMKNRAIVGNIGHFD........ | 346 |
6 | -9.400 | PF02826.19; Q98GE4_RHILO/107-283; D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | ali follow.. | 19 | 34 | ..IELAGKTIGIVGLGAVGQAVGHIAAHGFDLKVVATTRSMQ----PAPEKVGFLSIDALVEQSDIIVLCCPLTPETRGLISRERIARMKPNALLINVSRGPVVD..... | 132 |
7 | -8.750 | PF03059.16; A3DUI9_MALBX/3-277; Nicotianamine synthase protein | ali follow.. | 10 | 118 | .....MPIKIAFVGSGPLPLTSIVLASHLTKTSFDNYDINASANSKALGKRMVFHTTDIMDVTTALKDYEIVFLAAEKLKIIDHLAKYMAPGATLMLRSAHGARAFLYPV | 239 |
8 | -8.720 | PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain | ali follow.. | 13 | 1 | ....LKDKTIAIMGYGSQGHAHARNLHESGLNVVVGLRKGSSSWAKAESDGLKVMTVEEAAKAADV----IMILLPDEKQASV........................... | 75 |
9 | -8.640 | PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain | ali follow.. | 16 | 25 | ...GVLAGRAVVIGGGVSGWNAAQIAIGGFHVTLLDKDITKREADKIFGTKIQTVVSNAFELEKACLEADLVIGAVAPKLVTNELVSRMKPGSVLVDIAIDQGGCF.... | 135 |
10 | -8.600 | PF01564.17; SPEE_SCHPO/71-256; Spermine/spermidine synthase domain | ali follow.. | 24 | 13 | LNSHPNPKKVLVIGGGD-CVEEAILCDIDEDVIKVSKQYLPEMSAGFNHPKVKVHIGDFKFLQDYQNTFDVIITDSSDPPYFQLLSDALRGGGVITTQAE.......... | 133 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Alonso A, Rahmouni S, Williams S, van Stipdonk M, Jaroszewski L, Godzik A, Abraham RT, Schoenberger SP, Mustelin T. Tyrosine phosphorylation of VHR phosphatase by ZAP-70. Nat Immunol. 2003 Jan;4(1):44-8. Epub 2002 Nov 25. |