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Query: PF13460.6; G2TRC2_BACCO/7-191; NAD(P)H-binding, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GANGKIGKILVDLLQKSDRHIRAMVRKEEQAQFFRQKGVDAVLSDLEGTDELAEAAKGCDIVFTAGSGGHTDKTLAVKTMEAAEKAGISRFMIVSALQANHRENWSEAIKPYYVAKHYADRVLQSTKLNYTIIRPGGLLNDPGTGKIEASENLKRGTIPREDVARTILASLDEPLast
1 -79.300PF13460.6; G2TRC2_BACCO/7-191; NAD(P)H-binding  ali  100  1GANGKIGKILVDLLQKSDRHIRAMVRKEEQAQFFRQKGVDAVLSDLEGTDELAEAAKGCDIVFTAGSGGHTDKTLAVKTMEAAEKAGISRFMIVSALQANHRENWSEAIKPYYVAKHYADRVLQSTKLNYTIIRPGGLLNDPGTGKIEASENLKRGTIPREDVARTILASLDEP 174
2 -39.300PF05368.13; NMR1_NEUCR/67-329; NmrA-like family  ali follow..  19  5NAAGRQAASFIRVATAVGFHVRAQMRNLEGVVASTNPNVTVLQGELYTKETPAESDKGQCVDVTKNGP-GDEERIGMALADAAKKAGVQHYVY-SSMPDHHAYNKDWPSLPLWASKHRVEDYVKEIGIPATFVYTGIYNNNFTS-QAPFHPNAKLPWLDEHDVGPAILQIFKDG 225
3 -28.800PF01073.19; O22813_ARATH/15-299; 3-beta hydroxysteroid dehydrogenase/isomerase family  ali follow..  19  4GGLGFVGAALCLELVRRGRQVRSFRHSSPWSDDLKNSGVRCIQGDVTKKQDVDNALDGADCVLHLASYGEVNINGTCNVLEAAFKHEITRIVYVSTYNVLPYFPLDDHVDAYSRTKSIAEQLVLKSRMYTCAIRPAAIYGPGEDRHLPREPSVKSDWIYVENLVLAIILASMG. 230
4 -18.700PF08732.10; HIM1_YEAST/168-336; HIM1  ali follow..  11  1..........VTQLIIPRSETWPKLLPRIFSGTQKLEKFDIDNKNYVPGRSL-PSLCDISTMVCSLGSTFADYYLPFNLAQEFTNTTNKRLVVTTAFNNDFLSK----TFEYFRIKAKLENDLDEA--ELVILRPGPMCGQ................................. 142
5 -18.700PF03435.18; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain  ali follow..  19  5GGTGRVGGSTATALSKLCPELKIVVRNREKGEAMVAKNSEFSQVDINDAKMLETSLRDVDLVVHAAGP---QQAPRCTVLEAAIKTKTAYL................................................................................... 98
6 -17.800PF02254.18; Q92CZ9_LISMO/5-120; TrkA-N domain  ali follow..  14  5.GLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSIATHAVIANSTDENALRQLIRNFEHVIVAIGE---DIQSSILTTLILKEMGVKYVTAKAT-------------------NDKHAKLLDKIGAD-RVVHP....................................... 116
7 -16.800PF16363.5; A5G6F3_GEOUR/5-333; GDP-mannose 4,6 dehydratase  ali follow..  20  4GITGQDGSYLAELLLKKGYEVHGLIRRSSSFNHESSARLFLHYGDLNDASSLNKVLRDVEEIYNLGAQSHVRVSGAVRILEAIRETELNRFYQASSSEL-KETTPFYPRSPYACAKAYAYYITESYNLFACNGI........................................ 176
8 -16.400PF01370.21; RMLB_NEIGO/9-257; NAD dependent epimerase/dehydratase family  ali follow..  20  5GGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESPRYAFEQVDICDRAELDRVFARPDAVMHLAAESHVDRAGTFDLLEAARAYWAFRFHHISTDEV-TETTPYAPSSPYSASKAAADHLVRA-RLPSIVSNPLMILNALSGKPLPVYGDGAQDWLFVEDHARALYQVVTE. 239
9 -12.800PF04321.17; RMLD_SINFN/1-291; RmlD substrate binding domain  ali follow..  17  7GKNGQIALALKAQA-RPDVEILTLGRPN----------------DLACRSTVASSIRDADIIVSLAAYTAVDRDGVQALAEAAAGLGVP-VIHLST-VPYCEEDRTGPISVYGRSKLEGEFAVASANPNHTILRTSWVYSRYGQNELNVVADQLGCPTSADDISVAVMTIARR. 198
10 -12.300PF08643.10; YBL3_SCHPO/91-337; Fungal family of unknown function (DUF1776 topsan)  ali follow..  11  9SAWNPLASVIAHDLDRRGFIVVVLVRDASEAATVSLQQPYIQSLIVTHNEAVERFLLGKDAWISAFQQLSESFSNVSRMIPLLKSQKARIIGLSHGILSAYEPPNYAVPSILSSSIETFLRTLKETGLQVICIKLGNLFLNYDHSSSPGKSNYPPSLCTERKVLNKIFDSLLG. 218
11 -11.400PF02719.15; Q9K6L1_BACHD/277-560; Polysaccharide biosynthesis protein  ali follow..  17  5GAGGSIGSEICRQIACFQPETLVLLGHGENSDKLPNINIVTEIADIQDREKMFSIMDDRHVVFHAAAHKHVNVLGTKNTAEAASAANVNTFVMISTDKAVNPTSVMGATKRI--AEMIIQHMDMISDTRFVAVRFGNVLGSRGSVIPLFKKQIQKGTVTDPEMVRYFMTI.... 199
12 -11.300PF07993.12; Q9VLJ7_DROME/16-287; Male sterility protein  ali follow..  19  3GGTGFLGKVIIEKLLRS-RRVYLLVRPKKNETVEGRKLVTPISGDCSSDGDRRMVTADVQVIIHSAAALNINTRATRLMIQLAKEKGLEAFVHISTAFSNCPSQHIEE-NTYTYTKALAEQVIQMQDLPICVFRPAIILAN................................. 222
13 -11.100PF02558.16; Q9K9R6_BACHD/6-154; Ketopantoate reductase PanE/ApbA  ali follow..  16  5GS-GSIGLLLYAYLKLANWPALLVTNRPEQADHLNKEGLTFVAKSVTATPLSSFSAEEAEVGFITVKSFAVKLQRKKWDGLVFFQNGMTHLEILRQIPARA......................................................................... 116
14 -11.100PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  16  30.GYGDVGKGCAQSLSKMGARVLVTEIDPINALQACMDGYQIV--------TMETAAPLSNIFVTTTGCRDI----RGEHFAVMKEDAI--VCNIGHFDCEIDVAWLNANAKKDTVKPQVDRYTLANGVHIILLAEGRLVN.................................. 155
15 -11.000PF13561.6; I0I4U0_CALAS/13-250; Enoyl-(Acyl carrier protein) reductase  ali follow..  11  3ANKNSIAWGIAQALHAEGAELGFSYAGEVLKKRVEPLGSRVEECDVTSDEAIDVLFDKLDFLVHSIAYAPSEELGAKRAQPLMTDGG--AMLTMTYYGAEKVTP---NYNVMGVAKAALEATVRKDRIRVNAISAGPIKTLAASGV-YVGQVAPMGNVDQEDVGHAAAFLLSD. 220
16 -10.600PF07991.12; ILVC_METAC/15-178; Acetohydroxy acid isomeroreductase, NADPH-binding domain  ali follow..  16  10.GYGSQGHAHARNLHESGLNVVVGLRKGSSSWAKAESDGLKV-------MTVEEAAKAADVIMILLPDEKQASVYYSQIEPSLEAGNA...................................................................................... 89
17 -10.300PF03446.15; Q8FTI1_COREF/15-184; NAD binding domain of 6-phosphogluconate dehydrogenase  ali follow..  8  6.GLAVMGSNLARNFARNGHTVAVYNRSTDKTDKLISDYATDGNF-TKTVEDFVAALEKPRRAIVMVQAGAATDAVINQLADAMEEGDI--IIDGGNALYTDTV--------------CREKEMAARGRHFVGAGISGGEEGALNGPSIMPGGPKESWEALGPLLESIAAKVD.. 161
18 -10.300PF00106.25; YOXD_BACSU/7-201; short chain dehydrogenase  ali follow..  12  7GGGRGIGRATALALAKEGVNIGLIGRTSANVEKVAEEKAAFAAADVKDADQVNQAVADIDILINNAGISKFGG--TRAVLPEMIERKAGDIINISSTGAAVTSAYSASKFAVLGLTESLMQEVRKHNIRVSALTPSTVASD................................. 185
19 -9.670PF01113.20; DAPB_VIBCH/2-125; Dihydrodipicolinate reductase, N-terminus  ali follow..  15  7GAAGRMGRNLVKATHQNLSELGAGSERPESSLVGVDIGCGIGKQGIVLVDNLEQAVEQFDVIIDFTAP-----ASTLANLALCEQHGKKLVIGTTGFTDAQ......................................................................... 105
20 -9.560PF01118.24; DHAS_YEAST/6-132; Semialdehyde dehydrogenase, NAD binding domain  ali follow..  18  6GATGSVGQRFILLLANHPHELKVLGASSRSAGKKQTDLLPESATDIIVSECKSEFFKECDIVFSGLDADY-----AGAIEKEFMEAGIAIVSNAKNYRREQD........................................................................ 111
21 -9.150PF01210.23; GPDA_COXBU/7-162; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus  ali follow..  14  6.GAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNFPETLKAYCDLKASLEGVTDILIVVPS.......................................................................................................... 79
22 -9.110PF08659.10; M2UMU6_COCH5/2217-2396; KR domain  ali follow..  12  7GGLGGLGREIMRWMVSRGARHFLVTSSRAFIREMEAQGVVVHASDISNRAVLEATLEDADNMLSNMTVEQYHRALAPKYLHELLPKDMDFMVFLSSMSGIIGNPAQANYAAGNTFEDGLARHRAANGLKGVSFDLGLVLE.................................. 180
23 -9.080PF02629.19; SUCA_CAEEL/31-124; CoA binding domain  ali follow..  14  10GFTGKQGTFHGKQMLEYNTKVVGGVNANKAGTEHLGLPVFKNVSEARNKTGADASV--------------VPASAAGSAIEEAMDAEIPLVVCITE.............................................................................. 93
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 7 2 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rychlewski L, Zhang B, Godzik A. Functional insights from structural predictions: analysis of the Escherichia coli genome. Protein Sci. 1999 Mar;8(3):614-24.