FFAS03 results for PF14580

Query: PF14580.6; H3BFR2_LATCH/1-175; Leucine-rich repeat, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.

						`. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 .`
#	Score	Template	Links and tools	%id	First	`MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVIENLGATLDQFDTIDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRIGEGLEQALPNLRELILTSNSIQELGDLDPLASIKSLTFLSILRNPVTNKKHYRLYVIHKVPQIRVLDFQKVRLKERQEAEKMFKGKRGAQLAKDIA`	Last
1	-75.000	`PF14580.6; H3BFR2_LATCH/1-175; Leucine-rich repeat`	`ali`	100	1	`MVKLSAELIEQAAQYTNPVRDRELDLRGYKIPVIENLGATLDQFDTIDFSDNEIRKLDGFPLLKRLKTLLMNNNRICRIGEGLEQALPNLRELILTSNSIQELGDLDPLASIKSLTFLSILRNPVTNKKHYRLYVIHKVPQIRVLDFQKVRLKERQEAEKMFKGKRGAQLAKDIA`	175
2	-18.200	`PF13855.6; C3Y9A4_BRAFL/119-179; Leucine rich repeat`	`ali follow..`	27	2	`..........................................RLYDLSLDSNRLTHVKQFTGLENLLSLTLSNNRIEKIEAGSFAYLDRLQHLYLENNLL...........................................................................`	61
3	-13.500	`PF12799.7; A4HHM1_LEIBR/66-108; Leucine Rich repeats (2 copies)`	`ali follow..`	20	1	`.........................................KWLKYLNLAVNNITVIDGLQGCEALERLDLTLNFIAEPTS..............................................................................................`	40
4	-9.500	`PF00820.19; OSPB_BORBU/36-296; Borrelia lipoprotein`	`ali follow..`	14	185	`...................................................GKVKVFDTAGSNKKTGKWEDSTSLTISADSKKTKDLVFLTDGTITVQQYNTAGT-SLEGSASEIKNLSELKNAL..................................................`	260
5	-7.480	`PF11047.8; SOPD2_SALTY/1-319; Salmonella outer protein D`	`ali follow..`	6	223	`..............FNITTQFFKIGYWELEGEVLFDMVHPTLSYLLQAYKPSLSSDLIETNTMLFSDVLNKDYDDYQNNKREI----AILRRIYRSHNNTLFISE......................................................................`	310
6	-5.890	`PF07978.13; Q7VX89_BORPE/3-102; NIPSNAP`	`ali follow..`	13	2	`................................................................EERDYRIKPGKAGLFVATYEAHGLALRFLGYFMSEIGELNHVVAWWAYDSLDERDAARSRMLADPQWQAYLERVTDLIDLQQTRILKPVS.....................`	97
7	-5.450	`PF15094.6; F6ZZ04_HORSE/2-190; Domain of unknown function (DUF4556 topsan)`	`ali follow..`	15	41	`.......................LSLRGELVASLQD------------------ASLMGLHVDINTVTITIPNPRQDLLQRRGMGGGDGRVFVHLPKQRWDLVKSGSHLEESLSLKFLWVHQSSIFTVTENRGSVVVDVPAADAMWSQRSEEQNGAPGMQAL.............`	172
8	-5.300	`PF00010.26; BHA15_RAT/73-125; Helix-loop-helix DNA-binding domain`	`ali follow..`	16	1	`.....................RRLESNERERQRMHKLNNAFQALREV------IPHVRADKKLSKIETLTLAKNYIKSLT...............................................................................................`	53
9	-5.230	`PF01827.27; Q9BKX3_CAEEL/101-241; FTH domain`	`ali follow..`	11	5	`......KSFLEILKLKKRVNVKKIDLKNFLFTDILSIISYMNVIEYIKMQYVQFERLTCLDQWKNAHYCIIVDSELENVPIEDFFHFKEFE-VESRSFSTQNAIEINDLLKRSSFQSCTI.......................................................`	124
10	-4.840	`PF12498.8; B9SZ77_RICCO/317-442; Basic leucine-zipper C terminal`	`ali follow..`	15	6	`.VKMAEETVKRITGLNSLFHTIP-EMSTMSMPSFDGSPSDTSTDAAVPVQDDTEHQFYQPPNNPLSTHDPRVNNALADISS-VENVQPHSGAAGLGGNKMGRTASLQRVASLEHLQ...........................................................`	118

FFAS is supported by the NIH grant R01-GM087218-01

jobs submitted since Jan 1, 2011

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