current user: public
If you have questions about the server, please let us know.

Query: PF14664.6; R9ABX2_WALI9/151-516; Rapamycin-insensitive companion of mTOR, N-term, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .
# Score Template Links and tools%idFirst GLTDALKRSFRLKYELDQSVLINGVKECLSDSAGGLVRTVAYRLLRHSLVDYSSAQLYNSYGINIYLIRSLARDSSDQLEKEQAVFFIRALVDLGNPHGLFIDQSIVRAIISIAENGDDSLRYFCLELLAEIAILDMELLSKSQGLNILLSALTGSSPDLAHFAPVVASIFCYTLDHPSTRKYIKPGTDLEVSMTAFTDVPSAHFKASNARIERLKCANSILVVLLKNWSGLLYFCVNDRNTVRTLIDALRVPSQELREALLDLMFELLIIKTPDWYVASLEGRRQTMYNRSTGQRKAPERSAQDSDKPEKITIIDHYIALLLVVLIDGGLIEGLTAIVEEKNQVLTRKATLLLGELLRKGNRILPLast
1 -105.000PF14664.6; R9ABX2_WALI9/151-516; Rapamycin-insensitive companion of mTOR, N-term  ali  100  1GLTDALKRSFRLKYELDQSVLINGVKECLSDSAGGLVRTVAYRLLRHSLVDYSSAQLYNSYGINIYLIRSLARDSSDQLEKEQAVFFIRALVDLGNPHGLFIDQSIVRAIISIAENGDDSLRYFCLELLAEIAILDMELLSKSQGLNILLSALTGSSPDLAHFAPVVASIFCYTLDHPSTRKYIKPGTDLEVSMTAFTDVPSAHFKASNARIERLKCANSILVVLLKNWSGLLYFCVNDRNTVRTLIDALRVPSQELREALLDLMFELLIIKTPDWYVASLEGRRQTMYNRSTGQRKAPERSAQDSDKPEKITIIDHYIALLLVVLIDGGLIEGLTAIVEEKNQVLTRKATLLLGELLRKGNRILP 366
2 -13.000PF04826.13; ARMX3_MOUSE/110-363; Armadillo-like  ali follow..  9  1........SPNSDDTVLSPQELQKVLCLVEMSEKPYILEAALIALGNNAAYAFNRDIIRDLGGLPIVAKILNTRDPI---KEKALIVLNNLSVNAENQRRLKVYMNQVCDDTVTSRLNSSVQLAGLRLLTNMTVTNEYQHILANSISDFFRLFSAG---NEETKLQVLKLLLNLAENPAMTRELLRAQVPSSLGSLF---------NKKEYKEVILKLLIIFENINDNFKWEENEPAQNHFSEGSLFFFLKEFQVCADKV.......................................................................................................... 238
3 -12.900PF10508.9; A7SP09_NEMVE/2-505; Proteasome non-ATPase 26S subunit  ali follow..  11  106ELERCSGTVNGVLALMDKEDLLSYIARGM-ADEHLKNAQIASNVFTNLAKHEAGLKVLFDSHLQSEFNALLK---TKDTVRMRVYDMYITVQAHSPKAFDVCESGIFEKLISELDGRDVLVQMNCLELLTKLASISPEYLDQKGVVTKLNNLLLEVETDP--LITLIIPGIIKFFGTLATAHPLETTQQYPQFLEQTYSM-------SCGDPTLMPIAMETIGVIAHSEDGVFNNQGRNKHIMKTIFGHATSSQVDLRKRALEALASIFYSEQLTPSEELCEFAKVLYKNMAAAPLEAIFTVAKQPFEELRCSALCLLRSLARYMINCPGFLEYLLDRRTEFEKSGKEHKYDLIKELVH....... 465
4 -10.900PF05804.12; KIFA3_HUMAN/13-720; Kinesin-associated protein (KAP)  ali follow..  10  272YLLLNLAEDTRTELKMRNKNIVHMLVK-ALDRDNFELLILVVSFLKKLSIFMENKNDMVEMDIVEKLVKMIPCEHED---LNITLRLLLNLSFDTGLRNKMVQVGLLPKLTALLGNDNYKQIAMCVLYHISMDDRFKSMFAYTDCIPQLMKMLFECS--DERIDLELISFCINLAANKRNVQLICEGNGLKMLMKRALKIRNISQHDGPTKNLFIDYVGDLAAQISND---LANLTIPDLDLVPYLKDKLKPGAAE-DDLVLEVVIMIGTVSMDDSCAALLAKSGIIPALIELLNAQQEDDEFVCQIIYVFYQMVFH--ATRDVIIKETQAPAYLIDLMHDKNNEIRKVCDNTLDIIA........ 649
5 -7.990PF05918.11; D7TJH2_VITVI/11-547; Apoptosis inhibitory protein 5 (API5)  ali follow..  9  2...................EKLYEYGERLNEAKDKSQNVEDYRGI-------------------------IAAAKGSIKAKQLAAQLIPRFFKFFPD----LSDAAVDSHLDLCEEEELGVRVQAIRGLPLFCKDTPEYVSKI--VDILAQLLTAEENVERDAVHKALLSLLRQ-VDDPSTDENLREKVLNFIRDKVFPLKAELLKPQEQMERHI---TNLIKKSLED------VTGAEFKMFMDFLRSLTLFGEKAPPERVQELIEII-----GQADLDAQFNVSDGDHIDRLISCLYMALPFFVRGASNSKFLNYLNKHIIPVFDKLDLLKNLAESSPYSAPQDSRQ---ILPSVVQLLKKYMP 321
6 -7.850PF12231.8; Q5BCS0_EMENI/131-504; Rap1-interacting factor 1 N terminal  ali follow..  10  15QFFGALRAYEKLPTEEEILHKMSLIAEFIQRDLDTNLVIQALKLSVVLVWHPQISPQLPDEFKLFLIEHSVVCLESENLPKSVVTHYL--VLSTQKFPARIITAARTTRILGMLHSITDRVKGNRLMIYERLFDVAKPTFLAL--MDHLISGLLHQIKNVRLNALELGFNVYMASGSNS-----TLSKTLRDIFDRPLANNRKLVSEVSERMSRMMSNPETGEHVPQIWGVITLLLRSKRFNVLVLQKCFNCNDPEIKSKAIGNWNRFV................................................................................................. 304
7 -7.370PF17741.1; A0A151PBS4_ALLMI/1-268; Family of unknown function (DUF5578 topsan)  ali follow..  12  13.........................LLAFLQEWDNAGRAARSRILDNFIEANQGLELEFSQGASLFLARLTAMNGTCLDQLLKAIGIFLSAASGHRYLIEFLEVGGVLTLLEILGLSQEEDKKESIKLLQLVANAGRKLICESYGVRSIAEFMASS--KSEKAQRQVQILLDSLGHGNPKYQNQVYKGLIALL--------------PCTSPHAQQLSLQTLRVVQAI--------KSHPSIVEAVLGVLRSMELEVQYEAIQLIKDLT................................................................................................. 250
8 -7.350PF17822.1; G3S7I6_GORGO/1-229; Family of unknown function (DUF5584 topsan)  ali follow..  12  10...................QIWVKMYGYFAGLCRRLQKFWRVTVKGFFVKKKEKKIPSAETYF-VVLGQVLMNESLPIEKRAQAAQKIGLLAFTGGPPAGNFAAEYMEEVAHLLQDEEPKIKILLLQSVACWCYLNPKRAKSLQFIPILISFFEGRFNSYLLLKFWTCYVLSVMTNNLSCVKELKDHSALKYHLQMLAA....................................................................................................................................................................... 207
9 -7.180PF07539.12; E5AF73_LEPMJ/886-1482; Down-regulated in metastasis  ali follow..  11  9AMLSVFAKFQNPK-VLYRTDEVRQALLALLSNGDVDIQKAALKALSAVIAHQEQLLNLLDDA-DELPLFLSDGKLHDD-EVAHILPIVLRLLSGKRGLESKRKAVFVGLKNRFGDEAIHQFLDIAFGPLSRISLIQNSSLDEEGMLNLLDDLLGTLENTFAPFTSAVVDPVLYCAQTSLLKAVRQRALHLAKLFTNSPDFDWGLYMQAEQLPIETAQSVSGILRLFAAWS-ALFLVEYNKDVLIKAIDCLDVPSDVVRCFVLEEIIRNIVFLVTNQGATTTTESKLLQNRVQTEIIQQYSNVMLSRVGNSGVQTVADMAPYVTGSVEARSMIEIATFLLRQPAKRVNSRTKL---GLLKILHEFIK 444
10 -6.680PF08045.11; E9DYC2_METAQ/1-287; Cell division control protein 14, SIN component  ali follow..  12  105.........................................................................DGQNDLLILSALDLIQGVLLLHPPSKTLFSRQNMNLLLDLLEPFNCAIQSATLLTLVVALIDTPRTFEGLDGLLTVTSLFKSRSTSREVKLKLVEFLYCYLMPETPSIPRADQRDSVPAMLQRSPS-----KLAGAFNAESRRKRAGSSGLVTLTTEEKQELLSRHLSSVEDLVKDLK................................................................................................................... 282
FFAS is supported by the NIH grant R01-GM087218-01
1 4 7 5 9 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40.