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Query: PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst PPSPNGSLKSPPSKELLTSNTASTLCISSRSESVWTNTSRSKWDIYHKPIIVMSVGAAVFLFGTVITTLSCFEIKNNEVYKMCGPAFLSMGLMLLVCGLVWIPIIRKKQKQRQKSQFLQSLRSFFFNRLast
1 -99.800PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family  ali  100  1PPSPNGSLKSPPSKELLTSNTASTLCISSRSESVWTNTSRSKWDIYHKPIIVMSVGAAVFLFGTVITTLSCFEIKNNEVYKMCGPAFLSMGLMLLVCGLVWIPIIRKKQKQRQKSQFLQSLRSFFFNR 128
2 -14.000PF16311.5; H2L5R6_ORYLA/1-133; Transmembrane protein 100  ali follow..  22  57...................................................TIPFGVVVLIAGIVVTVVAYSFNSHGSTISYFGLVLLSAGLLLLASSAICWKVKLERKKERRRESLVTNQRSIF... 133
3 -9.510PF05915.12; F6WJI3_MONDO/57-193; Eukaryotic protein of unknown function (DUF872 topsan)  ali follow..  19  27......GRSSTQSSQWSFSTISNGTQRSYRAFCSWTQHPQKNRRVVLASFLLLSLGLMLILVGV--------GLQVTPSPGVSSAIFFVPGFLLLIPGVYHVIFIYLGVKGHRGFQF-FYLPYF.... 137
4 -9.240PF10177.9; W5KY66_ASTMX/13-159; Uncharacterised conserved protein (DUF2371 topsan)  ali follow..  21  111...............................................................................LKVFGPLVMGIGIFLFICANA---VLHENRDKKTK.............. 142
5 -8.470PF17628.2; INCD_CHLTR/1-141; Inclusion membrane protein D  ali follow..  17  35...............................................KRLVAVAVATILAVALLVVAGLLFSGVLCSPVSVLAASLFFGVGAFLLVGGVLTTEAVTRERLHRSQTLMWNNL....... 112
6 -8.390PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174  ali follow..  16  2..............DFSLNVFSLTPYTPSTADIQVSDDDKAGATLLFSGIFLGLVGITF----TVMGWIKYQSVSHFEWTQLLGPILLSVGILIAVCKMLSCQLCKESEERVPDSEQTSGGQSFVFT. 115
7 -8.090PF17094.5; YOAG_BACSU/8-126; Uncharacterised protein family (UPF0715 topsan)  ali follow..  21  1..................................................YLMTLGLSSLTFGLLLGFYSFVMYGDMIIALFTAAIALLYG--FVVYGLFAVPLQMKLQKKARTFNVIYSVVAFI... 77
8 -7.570PF13903.6; TM182_MOUSE/15-220; PMP-22/EMP/MP20/Claudin tight junction  ali follow..  13  91...................................SYDSAIIYRGFWAVLLLLGVVAALTASFLIICAAPFS---SHFLYKAGGGSYIASGVLFVILYVIWVQAVADMESYRALRM............ 171
9 -7.490PF07235.11; Q8U4X9_AGRFC/2-84; Protein of unknown function (DUF1427 topsan)  ali follow..  20  7...........................................................LGAGLLVGIVYSL----LNVRSPAPPVIALVGLLGILVGEQIIPFARS..................... 50
10 -7.410PF10027.9; A5V929_SPHWW/7-156; Predicted integral membrane protein (DUF2269 topsan)  ali follow..  10  43..................................................TVVIADFLFTATAVLVQPVTGVWLAHLVGWPLDSPWILASVGLYILIGCFWLPVVWMQMRMRDLAR............ 108
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Veeramalai M, Ye Y, Godzik A. TOPS++FATCAT: fast flexible structural alignment using constraints derived from TOPS+ Strings Model. BMC Bioinformatics. 2008 Aug 31;9(1):35