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Query: PF15105.6; G1LS64_AILME/13-201; TMEM61 protein family, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst APVLRYCMTVSGTVLLVAGTLCFAWWSEGDAGAQPGQPAPPTGRPVPEAPSPLLRSVSFFCCGAGGLLLLFGLLWSIKASTRGPPRWDPYRLSRDLYYQTVESSEKESYRLPELAAIPTYEEAMCCSLAEGPPTPAADPVEGGLKDSASGDALLGTQDPLPPPSYESVIGATHGVSGETAPGTAGSCPGLast
1 -125.000PF15105.6; G1LS64_AILME/13-201; TMEM61 protein family  ali  100  1APVLRYCMTVSGTVLLVAGTLCFAWWSEGDAGAQPGQPAPPTGRPVPEAPSPLLRSVSFFCCGAGGLLLLFGLLWSIKASTRGPPRWDPYRLSRDLYYQTVESSEKESYRLPELAAIPTYEEAMCCSLAEGPPTPAADPVEGGLKDSASGDALLGTQDPLPPPSYESVIGATHGVSGETAPGTAGSCPG 189
2 -21.900PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51  ali follow..  18  2.SGSQYALCALGVGLVALGVVMIVWSLVPANTGFNNSSSGSGGDDGIDGKRNKASSVAFVLAGSGVAMLLLSLCLGLRNKQREQLRRQEIQNQRD----REQEERETAEERAQRYAVPSYEEVVGSGQYPVRQSNLRPSVSQ-------------------LPSYDDLVQVDGIHSPSATISTSSHRPG 168
3 -15.500PF15664.5; E2RC46_CANLF/29-168; Transmembrane protein 252 family  ali follow..  18  14........................................................LAYMLLPLGFVILLSGIFWSTKSKGVFTHVLRRHLSHGALPLATVDRPDFY----------PAYEESLDAEKQPCPTEGEVSDIPPPLYTEPGLEFEDAAAHPEAPPSYEESVAGGVPAATPLQDAERQS... 140
4 -10.900PF07843.11; E4T0S5_PALPW/14-128; Protein of unknown function (DUF1634 topsan)  ali follow..  14  2GKLLRAGVLTASAITVF-GGILYLIQHHGSTANYGVVASNEIFRGAPAYLRELSSILPQIIRFDGAAIVQFGLIVLIATPLRVVFSLISFAIEKDKLYVGI........................................................................................ 102
5 -9.870PF11669.8; H9G3Z2_ANOCA/43-144; WW domain-binding protein 1  ali follow..  21  14............................................................CCIYYYELWWFWLLWTVLFHRRAKLRLQQQQRQREINLIAYHGACNYPLRMLASFKLPAYEEVA-------------------------------HRPTTPPPPYS....................... 102
6 -8.680PF15471.6; F1S380_PIG/2-320; Transmembrane protein family 171  ali follow..  20  111.......CLIFGFLFLTSGMLILGIWVPGCGSDWAQEPLNETDTADSESQICGFLSLQI----LGPLIVLVGLCFFVVAHVK---KRNNLNGGQD-----ASESEERQPQHMEPVQVTVGDAVIIFPPP--PPPYFPETSAAAASQGPGADDLLPNES---PPSYYSIF.................... 257
7 -8.110PF05514.11; Q8H080_ORYSJ/1-138; HR-like lesion-inducing  ali follow..  11  85....SFGAYLLLIYLAFITPVVYDFYNYDMEKSEFVQLF-----------MKFTQNLAL----FGALLFFLGM.................................................................................................................... 138
8 -8.050PF10377.9; U4LJ69_PYROM/1026-1180; Autophagy-related protein 11  ali follow..  14  31...............................................RARDEASEKIAFKSFKTGDLALF------LPTRNQVTRPWAAFNVGAPHFFLREQDTHKLGARDWLLARITRVEEKVVDLSKRSTNSGLITNPASEAGSAKSVTGDEKEVDEDNP........................... 139
9 -7.850PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin  ali follow..  18  63..............................SVTTQTTPNATATPVTPSPRKSSFDAASF----IGGIVLVLGVQAVVFFLYK-------FCKSKERNYHTL........................................................................................ 122
10 -7.850PF15775.5; M3WDY8_FELCA/19-203; Domain of unknown function (DUF4703 topsan)  ali follow..  22  85.......TAVKSVSMLMVSALQSGWWKSS-VSSTSISSQMRSGSPVDTSEAEMLREVYL-------------ILWVIRRQLRQLARRQERRRRRHIRAHTGSRPDKQDARSP............................................................................. 184
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.