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Query: PF15179.6; F7FFN6_MONDO/6-191; Myc target protein 1, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MAKNATILESPWPENFWDDLIMSFTVSMAIGLVIGGIIWALLVCLSRRRASAPISRWSSSRRSRPYSHSLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVETDSQLMTLPSTNTSPIINTTHSLSRPDFHWSNNSLRVGLSTQTPPPAYESIIKAFPDLast
1 -135.000PF15179.6; F7FFN6_MONDO/6-191; Myc target protein 1  ali  100  1MAKNATILESPWPENFWDDLIMSFTVSMAIGLVIGGIIWALLVCLSRRRASAPISRWSSSRRSRPYSHSLNRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVETDSQLMTLPSTNTSPIINTTHSLSRPDFHWSNNSLRVGLSTQTPPPAYESIIKAFPD 186
2 -8.780PF15664.5; E2RC46_CANLF/29-168; Transmembrane protein 252 family  ali follow..  15  13...................ILAYMLLPLGFVILLSGIFWSTYRQASKSKGVFTHVLRRHLSHGALPLATVDRPDFYPPAYEESLDAEKQPCPTEGEVSDIPP----------------PLYTEPGLEFEDAAD-----------------------------------AHPEAPPSYEESVA.... 124
3 -7.880PF05393.11; ADP_ADE02/1-100; Human adenovirus early E3A glycoprotein  ali follow..  38  13..RNTTATGLTSALNLWASLDM-WWFSIALMFVCLIIMW-LICCLKRRRARPPIYR.................................................................................................................................. 73
4 -7.750PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51  ali follow..  15  4.........................SQYALCALGVGLVALGVVMIVWSLVPANTGFNNSSSGSGGDDGIDGKRN-LRNKQREQLRRQEIQNQRDAAREQEERETAEERAQRYAVPSYEEVVGSGQYPVRQSNLRPSVSQLPSYDDLVQVDGIHSPSATISTSSHRPGKNNRTPPPQYE........ 213
5 -7.740PF12191.8; G3TH99_LOXAF/1-129; Tumour necrosis factor receptor stn_TNFRSF12A_TNFR domain  ali follow..  26  79................WPILGGALSLALVVGLLSGFLVWRR--CRRREKFTTPIEE.................................................................................................................................. 116
6 -7.690PF01062.21; Q6MLK6_BDEBA/7-291; Bestrophin, RFP-TM, chloride channel  ali follow..  13  65..................AIFLGFRNSAAY---EGRKLWGSLLNVSRSLSRQALTLTGLTANDSESRRFLQLIAFAYCTKHQLRKTDATTDLKRLTPDLASELSQVEYKPAVLLRHLGQWVSDQKNAGRIDSITAGMFDKNLNDMSEILGGCER---------------SNTPIPPYAVLLHRT.. 219
7 -7.280PF17523.2; MPS4_CAEEL/1-78; MinK-related peptide, potassium channel accessory sub-unit protein 4  ali follow..  20  29...SSSCNRISYPTKYFDFLLVIIMTFVFLCLVYL-LIWIEVLLNSSR.......................................................................................................................................... 72
8 -7.220PF02214.22; Q18776_CAEEL/84-176; BTB/POZ domain  ali follow..  12  1.............................VRLNVGGKVFQTTRSTLMREPCSFLYRLCQDEMGLPTDRDETGAYL-----IDRDPDFFSPILNYLRHGKLIMNPGLSEEGILAEADFYNL.................................................................. 86
9 -6.980PF12966.7; Q2Y8G5_NITMU/5-101; N-ATPase, AtpR subunit  ali follow..  14  2..................SLLLALVGGVLLGAFFFGGLWWTV-----RRSIASPRPGTWFVGSMLLRTCIVTAGFY-AAPGKKILFAAVVGFIIARVVATQFLPTPLSPSLVRMG....................................................................... 97
10 -6.890PF15099.6; H9H1Z7_MELGA/1-128; Phosphoinositide-interacting protein family  ali follow..  17  88.........................LSMGLMLLVCGLVWIPIIRKKQKQRQKS..................................................................................................................................... 115
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Harder T, Kolodny R, Sitbon E, Li Z, Godzik A. Using an alignment of fragment strings for comparing protein structures. Bioinformatics. 2007 Jan 15;23(2):e219-24.