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current user: public |
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Query: PF15232.6; I3KXN7_ORENI/2490-2562; Domain of unknown function (DUF4585 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 | |||||||
# | Score | Template | Links and tools | %id | First | SYGQTPRRVLLDPETGKYFYIEVPVQPLRKMLFDPETGQYVEVLIPQQTMSHSGLYPPSAAPYPPLPNPSMYA | Last |
1 | -52.600 | PF15232.6; I3KXN7_ORENI/2490-2562; Domain of unknown function (DUF4585 topsan) | ali | 100 | 1 | SYGQTPRRVLLDPETGKYFYIEVPVQPLRKMLFDPETGQYVEVLIPQQTMSHSGLYPPSAAPYPPLPNPSMYA | 73 |
2 | -7.620 | PF01092.19; Q5KIJ1_CRYNJ/1-126; Ribosomal protein S6e | ali follow.. | 19 | 2 | ......KVNFSNPATGAQKLIDFEDERKTRIFMEKRMGQEVA............................... | 37 |
3 | -7.560 | PF16374.5; Q7N439_PHOLL/100-235; Cycle inhibiting factor (CIF) | ali follow.. | 15 | 79 | ........LVNDRRLGHMFLIDIPSNDQETVIYQSDLGQGALPPLKIADWLNSRGKDAVSL............ | 133 |
4 | -7.390 | PF17780.1; A0A061DDG2_BABBI/740-790; OCRE domain | ali follow.. | 17 | 5 | ........MTYDPNSDYFY------DHRLGVYYDAASGYYFT............................... | 32 |
5 | -7.180 | PF17161.4; Q8A0A9_BACTN/407-525; Domain of unknown function (DUF5123 topsan) | ali follow.. | 17 | 85 | ATGVTLDPGFTDAANGNFKVSNQ--TIIDNEIGDPR..................................... | 118 |
6 | -7.060 | PF03543.14; YOPT_YERPE/103-320; Yersinia/Haemophilus virulence surface antigen | ali follow.. | 19 | 148 | ........HLSGQMSAHAIAAYVNEKSGV-TFFDPNFGEF................................. | 178 |
7 | -7.050 | PF17136.4; B0VI20_CLOAI/43-106; Ribosomal proteins 50S L24/mitochondrial 39S L24 | ali follow.. | 13 | 2 | HMIKKHAKPTQQNPQGGIITMEAPIDASNVMLFNEKLNAVSKP.............................. | 44 |
8 | -6.930 | PF15644.6; R4M122_9ACTN/808-932; Papain fold toxin 1, glutamine deamidase | ali follow.. | 13 | 89 | ..HGSFAFLMSAWEGGSAHAWAAVNHNGEILFVDPQSGR.................................. | 125 |
9 | -6.840 | PF13619.6; A9AYW3_HERA2/7-64; KTSC domain | ali follow.. | 16 | 9 | GYDPTTQTLEIEFKNRSIYYVDVPENVYNELMQAASHGSYFNGCIRGA......................... | 57 |
10 | -6.700 | PF14345.6; K9T8G4_9CYAN/17-196; GDYXXLXY protein | ali follow.. | 20 | 17 | .............FSGKTIVLQTPVDPY-----DLLRGRSLRLRYNISRVDALERLP................ | 56 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26; |