current user: public
If you have questions about the server, please let us know.

Query: PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210
# Score Template Links and tools%idFirst NSGSQYALCALGVGLVALGVVMIVWSLVPANTGFNNSSSGSGGDDGIDGKRNKASSVAFVLAGSGVAMLLLSLCLGLRNKQREQLRRQEIQNQRDAAREQEERETAEERAQRYAVPSYEEVVGSGQYPVRQSNLRPSVSQLPSYDDLVQVDGIHSPSATISTSSHRPGKNNRNFLPIKIRRIKSEKLPMKNTGSSQPAAGISIEPLTPPPQYELast
1 -115.000PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51  ali  100  1NSGSQYALCALGVGLVALGVVMIVWSLVPANTGFNNSSSGSGGDDGIDGKRNKASSVAFVLAGSGVAMLLLSLCLGLRNKQREQLRRQEIQNQRDAAREQEERETAEERAQRYAVPSYEEVVGSGQYPVRQSNLRPSVSQLPSYDDLVQVDGIHSPSATISTSSHRPGKNNRNFLPIKIRRIKSEKLPMKNTGSSQPAAGISIEPLTPPPQYE 213
2 -21.900PF15105.6; G1LS64_AILME/13-201; TMEM61 protein family  ali follow..  18  2.PVLRYCMTVSGTVLLVAGTLCFAWWSEGDAGAQPGQPAPPTGRPVPEAPSPLLRSVSFFCCGAGGLLLLFGLLWSIKASTRGPPRWDPYRLSRD--TVESSEKESYRLPELAAIPTYEEAMCCSLAEGPPTPAADPVEGPPSYESVIGATHGVSGETAPGTAGSCPG............................................. 189
3 -13.200PF15471.6; F1S380_PIG/2-320; Transmembrane protein family 171  ali follow..  13  103GESRQFVQCLI-FGFLFLGMLISVLGIWVPGCGSDWAQEPLNETDTADSESQICGFLSLQIL--GPLIVLVGLCFFVVAHVKKRNNLNGGQDASESEERQPQHMEPVQVTVGDAVPYFPETSAAAASQGPGADDLLPNESPPSYYSIFHYGTPPPEGQGVTSERDCDS-----------------IYTISGTAPTSETSHTPSLSSELPPRYE 305
4 -13.100PF15664.5; E2RC46_CANLF/29-168; Transmembrane protein 252 family  ali follow..  14  14........................................................LAYMLLPLGFVILLSGIFWSTYRQASKSKGVFTHVLRRHLSHGALPLATVDRPD--FYPPAYEESLDAEKQPCPTEGEVSDIEAPPSYEESVAGGVPAATPLQDAERQS................................................ 140
5 -12.700PF11669.8; H9G3Z2_ANOCA/43-144; WW domain-binding protein 1  ali follow..  16  29.................................................................TVLFLFGCCCAYRHRRAKLRLQQQQRQREINLIAYHGACNYPPSMASFKLPAYEEVAHRPTTP------------PPPYS.................................................................... 102
6 -11.300PF12750.7; D4M5W5_9FIRM/1-70; Maff2 family  ali follow..  31  12....QTLVIALGAGLGIWGVINLLEGY------------------GNDNPGAKSQGIKQLMAGGGVALIGTILVPLLSG...................................................................................................................................... 68
7 -10.500PF16311.5; H2L5R6_ORYLA/1-133; Transmembrane protein 100  ali follow..  23  46TGGAELSCCTI-----PFGVVVLIAGIVVTVVAYSFNSHGS-----------TISYFGLVLLSAGLLLLASSICWKVKLERKKERRRESQT.......................................................................................................................... 123
8 -9.950PF18160.1; C6BRH8_DESAD/1-192; SMODS and SLOG-associating 2TM effector domain family 5  ali follow..  10  30HQALVFTISFLSIAQVIVAIGSLCGVDFPYIAS---------------------AKIEFLTITVSIIILVIANQDSLGVLLNQSASYHRCSNKLHELLGRINAELENETVAKEIYLGYSEVLEFYDLNHDMND................................................................................ 145
9 -9.930PF06724.11; F6ES84_HOYSD/193-262; Domain of Unknown Function (DUF1206 topsan)  ali follow..  13  1............AGYIGKGLVIATVGVLIIIATFRSQPDEAAGLDAALRTLAAQPYGYVFLGLVALAMVTFGIFSLAQSG..................................................................................................................................... 68
10 -9.880PF15029.6; H0VXD9_CAVPO/9-242; Transmembrane protein 174  ali follow..  11  29...........GATLLFSGIFLGLVGITFTVMGWIKYQSVSHFE---------TQLLGPILLSVGVTFILIAVCCKESEERVPDSEQTSGGQSFVFTGINQPITFHGATVVQYIPPPYGQSMVNPCGLLPSGGAAGAMPSPPQYCTICPQDNAAFVESEDYSSITDGRNSRSSLGADRLGEMQLEEEDYAR--------------FSSPPPYE 229
11 -9.380PF10176.9; M1VXF7_CLAP2/112-320; Protein of unknown function (DUF2370 topsan)  ali follow..  19  106HAAKNGSRAGLGITLIQYGFYMKDTGSNGAPDPNSHNFKSDEVTDGGPVTITGSEWMAYVLMVVGWFILIKSIAEFLKARRHEQLVLRSPDR......................................................................................................................... 209
12 -9.080PF13908.6; I3IYU5_ORENI/55-228; Wnt and FGF inhibitory regulator  ali follow..  10  29..GTRFC-CAFKSSRLDQTTC----KNYDTPPWMMTGRPPPKVDVALESAKDKTNLIVYVICGVVAIMALIGIFTKLGLEKTQRPHRENMSRALAHVIRHPASEHTDDAGLS-NIQTRLTANSFQSNQMNNAAQVPTLVSQP-YPGV.................................................................. 173
13 -9.060PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan)  ali follow..  22  18.SGAIMCLTIIGA---AAGVPYIIGALNKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVV........................................................................................................................................ 92
FFAS is supported by the NIH grant R01-GM087218-01
1 4 6 9 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster
Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;