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current user: public |
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Query: PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3, from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 | |||||||
# | Score | Template | Links and tools | %id | First | YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILV | Last |
1 | -73.000 | PF15432.6; F2I912_AERUA/17-140; Accessory Sec secretory system ASP3 | ali | 100 | 1 | YAYGSQIVLENPDHIHFKNTLMPSGERITSWSSRSVFQTTKDSAKLPLLTRGESYQLIFQGKTVPEGSIFFKISFFDYYGGPIEEYYLRTPSDYFTVPDTYNYYEIALHHGGCLSLDFNQIILV | 124 |
2 | -7.750 | PF07919.12; C4JTF4_UNCRE/662-1266; Gryzun, putative trafficking through Golgi | ali follow.. | 7 | 448 | .................RQTTTLNLALEVKWRRQDAEAPSSSAPRFVIPMGEPRVLATVTRASALPNFIHLDYTLENPSIHFLTFTITMEASDQFAF-SGPKSLAVQLVPLSRHTVRYNLLAAG | 565 |
3 | -7.480 | PF01426.18; DNMT4_ARATH/889-1033; BAH domain | ali follow.. | 9 | 1 | ......IEYHNGDFVYVLPNYITKDGLKKGSRRTTLKCGRNVGLKAFVVCQLLDVIVLEESRKASKASFQVKLTRFYRPEDISEEKAYASDIQELYYSQDTYILPPEAIQGKCEVRKKSDM... | 115 |
4 | -7.230 | PF02018.17; XYNC_PAEBA/197-346; Carbohydrate binding domain | ali follow.. | 13 | 9 | FEDGNIGNWRARGKLEVVSGIGHNSNRSLKTSSRSETYHGPLVEVLPYLQKGSTVHISFWAMYDEGPAGSLEKEFNRDTANLEYAMFASTTEADIIVPAESTGISGLRM............... | 133 |
5 | -7.100 | PF15028.6; A0A2I3G3P5_NOMLE/20-146; Pre-T-cell antigen receptor | ali follow.. | 11 | 27 | ..............VCLVLDVAPPGFDNPIWFSAGNGSALDAFTYGPSPATDGTWTNLAHLSLPSEE......................................................... | 79 |
6 | -6.700 | PF01223.23; Q95TI9_DROME/65-324; DNA/RNA non-specific endonuclease | ali follow.. | 8 | 101 | .................RGHLGAKADFDYAPEQRATFLFINAAPQWQTFNAGNWARVEDGLRAWVSKGVYGVTTLPNKDGVETPLYLAKDDNNNGLIPVPKLYFRVVIDPSSHRGIVF...... | 210 |
7 | -6.660 | PF11141.8; Q39X29_GEOMG/73-134; Protein of unknown function (DUF2914 topsan) | ali follow.. | 10 | 3 | .........................PIRHVW-----YRNGEVVGEQELQVKGQKWRTWSKRPIDRDSIGTWRVEALDSAGKLLKAVEFR................................... | 61 |
8 | -6.640 | PF17682.1; G0SF99_CHATD/38-186; Tau95 Triple barrel domain | ali follow.. | 9 | 1 | ............GALEHPMIIKNLDKGMKTFGQNNSFQSILDSASPQVLRYDNPTVRPLTSHNALTHNIVLKVTVPKRKRD-------APRVLRRKLQDNVGKYTVEPIGVINNTHRYRGFS.. | 106 |
9 | -6.600 | PF04862.12; F2DPS4_HORVV/28-184; Protein of unknown function (DUF642 topsan) | ali follow.. | 12 | 7 | ...............DFRNGPDKSQHAIPNWELSGRLGNDATIRQQLKVSRHTYYSISFIAARSCAQAEKLNVSVDPEFGVLPIQTVYTNDTYSWAFKPRHSTVWLSIHNTGIEE......... | 143 |
10 | -6.470 | PF03888.14; I2B6E8_SHIBC/27-210; MucB/RseB N-terminal domain | ali follow.. | 10 | 121 | ................................................VVSRDGTRYSYIVWMDTETKLPLRVDLLDRDGETLEQFRVISFAVNQMNPSIQALEKANL................ | 180 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Rychlewski L, Zhang B, Godzik A. Fold prediction by a hierarchy of sequence, threading, and modeling methods. Protein Sci. 1998 Jun;7(6):1431-40. |