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Query: PF15672.5; H0X6I6_OTOGA/20-333; Cell-membrane associated Mucin15, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst GSYGDENPEINTTQSIRESLKTVGNQPISLVSEATSNPNEKNLNTSNPITSHSPLLDLLNDMHAMKNISHNLSTETFSGTPKPTSMFSTTPVLVHGYVSKLPWNASITDKNPLLVSSPDTTPTVPLENFTWSLANDTTKPPDNSSSTVGLLPPEPTSKSVTPGIVEQTGWLTTDSESFAGFTPYPEKTTLQPTLKFTNNSKLFPNTSGPQKENRSTGIIFGAILGAILGASLLTLVGYVLCGKRKMDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPAGNDSSRPEGREDARDSIPMDDIPPLRTSVLast
1 -84.800PF15672.5; H0X6I6_OTOGA/20-333; Cell-membrane associated Mucin15  ali  100  1GSYGDENPEINTTQSIRESLKTVGNQPISLVSEATSNPNEKNLNTSNPITSHSPLLDLLNDMHAMKNISHNLSTETFSGTPKPTSMFSTTPVLVHGYVSKLPWNASITDKNPLLVSSPDTTPTVPLENFTWSLANDTTKPPDNSSSTVGLLPPEPTSKSVTPGIVEQTGWLTTDSESFAGFTPYPEKTTLQPTLKFTNNSKLFPNTSGPQKENRSTGIIFGAILGAILGASLLTLVGYVLCGKRKMDSFSHRRLYDDRNEPVLRLDNAPEPYDVSFGNSSYYNPAGNDSSRPEGREDARDSIPMDDIPPLRTSV 314
2 -10.200PF09786.9; B9HQ86_POPTR/12-670; Cytochrome B561, N terminal  ali follow..  102.ITSPSKDARDQPQLTNRQLGLIGVKPKVEPVVSESSKKPPKSNPTSSASNVLVPIHQLITCSHQKSRVGSDKSNAGSGNKMASFSTPSKSRNSPSFYLVPGANSPLPSVQSSPAIDSAVSTPWSDKRASYTKEIRTEEQLEQFLAEVDEKISESAGKYATPPPTIGGFGMASPNTVASPANTPGVTRSTPLRPVRMSPGSQKFTTPPKIGEGDLPPP................................................................................................ 318
3 -10.100PF08192.11; SSY5_YEAST/2-693; Peptidase family S64  ali follow..  7...............................NKKKNEEKENTDLPADNEQNAAETSSSNVSGNEERIDPNSHDTNPENANNDDASTTFGSSIQSSSIFSRGRMTYGTGASSSMATSEMRSHSSGHSGSKNSKNLQGFKDVGKPLRAVSFLSPVKEEESQDTQNTLDVSSSTSSTLATSENARENSFTSRRSITLEYIHKS.................................................................................................................. 175
4 -9.930PF17076.5; SBE22_CANGA/1-813; SBE2, cell-wall formation  ali follow..  30.SSRKESGMRSRTSSGSAQAVGLGLGRRPSDNLFHGHADPLDTMQMLSEALPQPPKIEHGMRRERPISNDSIMTTKSSEIFSTSSSDTQSNISVATNDSEDHSFGMDKSVDNSSTNATLTNRSIENRSNGDSYSIGEKSDVSVNRSTKSGNNPLQRTQSETISVNMSHNRSMNGAMKQPTPPFMGKNSSIPNLRYNSQPQQDNRSVPNGEFGSKLYNLSNSTSAIIPNAGT................................................................................... 259
5 -9.810PF06933.11; O44418_CHIPA/1-756; Special lobe-specific silk protein SSP160  ali follow..  85.FNMIAMISANVQAIQSGSGSTSGSSSSSTTSTSNSTTTTSNSTTTTTNSTTSSNSTSSGLTSSASVVSLIDTIAWVYQDSSVGIAYLMVSILALFYGQSVSAPPYPDLGIPALPANCSGPGVPQSVQIRAAIAYVNITIYFINMTGQQFEDLQGPVATDCGCPNTTSVAPLVLEWEAILAALQALANSTASANSTTSSNSTTTTTTNSTSTTTTNSTTTTNSTSSSNSST................................................................................... 314
6 -9.350PF08549.10; E3Q6J3_COLGM/3-717; Fungal domain of unknown function (DUF1750 topsan)  ali follow..  463.PAPEPVKEPSPVPPPASSLPPAAGADTGALGSRRPSQAGSTHSGVMVGDSDIDMGGTAAGLLDEMHTGFSANSTPLNNFPTPQTHMSALNSTAGTPANANAPSPAPVPPTIPEETETQASAGASAGAAEDVTMGNTGSTKNTPATAPDHGTGSGEWVVVPKGGTSPDPGAGAATSTGATEGDEPKAAAKIPSAAGTPVETQTPGGFSSLGDLDSAGDAMASYGASMADGL----------------------------DMNMEMEDS------AFGD-AFHGVSSTNT......................... 715
7 -8.550PF03035.14; Q917X0_9CALI/1-251; Calicivirus putative RNA polymerase/capsid protein  ali follow..  58..............................QATKQLQADMIAIKQGVLAAGGFSPTDAARGAVNAPMTQALDWSGTRYWAPGSMKTTSYSGKFVSMNPVRQVEFPQPKKSAAIPSSASSVSSGRTNLTNSTQSTVVSTSSAPPSRGSSAPSTLSRATTRTSNWVEEQNRNLEPYMRGALQTTFVTPPSSRASSNGTVSTVPKGVLDSWTPAFNTRRQPLFA............................................................................................. 248
8 -8.150PF15921.5; G5BJQ7_HETGA/1-1111; Coiled-coil domain-containing protein 158  ali follow..  10  856.SNSSMKPRLLQPASFTRTHSNVPSSQSTASFLSHHSRKTTALKEDPTKDSVINEEPTVQLSKAEDKGRAPSLGALDDRVRDCIIESSLRSDICHSSSCFVQTRKLTLSFLCFREPVLLHAELEDPSSCFTFPSTASPSVKNSASRSFTSPKKSPVHSLLTSLAEDSVGSSPQYGSTKTIPSPDSAKDSQSLPVETTGKTCRKLQNR----------------------ESLQTLVEDL---QLKNQAMSEKRIVKDQEKMLLK.................................................. 1111
9 -8.100PF17061.5; L9L768_TUPCH/3-296; PARM  ali follow..  11  25.PLTPTWTSSPQNTAAVTTSPDSGSHSSSVPPVPASAPTSPLPKNSSIEPKVGATSPALNQEVTDVSFTGLSSTTGGVHFTPTSPEEHDQSTAEASVPTTGSQSPTEPSTVTSTPAPASSPSSLSVSPPEISSVPVTSNHSSTATNIQPTGAPTAPASPTEEHSSGHTPTSHATVQPESKEKTPQATVLEPETCELMDTTTASPVVIMQEVEHALSSGSIAAITVTVIAVVLLGVAAYL----RHS---SYGRLLDDHD----------------YGSWGNYNNPLYDDS........................ 294
10 -7.380PF17632.2; Y6505_BACAN/1-91; Family of unknown function (DUF5513 topsan)  ali follow..  15  18.............................................................................................................................................................................................................................................YLILSLRKKKGVRKDKFIE------IPIT-----FDYNFGEKREYQPSVNGKEKYTN-ENIHAQVSVVNVKGER... 89

FFAS is supported by the NIH grant R01-GM087218-01
1 4 0 1 8 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Wooley JC, Godzik A. Probing metagenomics by rapid cluster analysis of very large datasets. PLoS ONE. 2008;3(10):e3375. Epub 2008 Oct 10.