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Query: PF15780.5; G3VKZ4_SARHA/34-131; Abnormal spindle-like microcephaly-assoc`d, ASPM-SPD-2-Hydin, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .
# Score Template Links and tools%idFirst AFLRLSHFSRPPFLCFGDVRVGVSRTLPLVLDNPNEEGVEVSVARLPAADKGFSISPQSCALQSKERISLSITWTPAKEGRVREMITFLVNDILKHQVLast
1 -53.700PF15780.5; G3VKZ4_SARHA/34-131; Abnormal spindle-like microcephaly-assoc`d, ASPM-SPD-2-Hydin  ali  100  1AFLRLSHFSRPPFLCFGDVRVGVSRTLPLVLDNPNEEGVEVSVARLPAADKGFSISPQSCALQSKERISLSITWTPAKEGRVREMITFLVNDILKHQV 98
2 -32.400PF12371.8; A9UVP6_MONBE/19-102; Transmembrane protein 131-like  ali follow..  17  1......PVLVPPFLRFPQQELCKVAERVVTVVNGNPRA-DLHLYSISSNSNDFHSSWEHAVVAPGDNTTFTIAFMSETLGPVEANITLLT........ 84
3 -29.200PF14874.6; Q4DUQ4_TRYCC/1589-1690; Flagellar-associated PapD-like  ali follow..  14  6........VMPSVLSFGRVIRGNRYALPVVFTNTSTVPCRYRVTLPTECKDILRVHYPRHFLAPGLTVMAQVEISGTQPLGAMSFSLNVTHEGGLIPV 95
4 -21.600PF07610.11; F0NZP4_WEEVC/51-148; Protein of unknown function (DUF1573 topsan)  ali follow..  12  4.........SESNFNYGDVKMNESKDHYFVITNEGKSPLVIK--DARATCGCTVPEWPKEPIPAGGKDSIKVQFTAGVLGNTQKKVSLTTNTAQGLEE 91
5 -18.400PF14646.6; H0WS01_OTOGA/246-665; MYCBP-associated protein family  ali follow..  14  231........GIAVRLTF-ETVEGEKTSSDLTVVNNGTVAIWYDWRRRDNKMQRFYFNNREGVILPGETKNFTFFFKSLTAGIFRESWEFGTH....... 322
6 -16.900PF00927.22; EPB42_HUMAN/588-686; Transglutaminase family, C-terminal ig like domain  ali follow..  13  9................EKAEQYQPLTASVSLQNSLDAPMEDCVISILGRGLIHRERSYRFSVWPENTMCAKFQFTPTHVGLQRLTVEVDCNM...... 85
7 -12.300PF00635.26; VAPB_HUMAN/7-111; MSP (Major sperm protein) domain  ali follow..  19  1....VLSLEPQHELKF-RGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRR--YCVRPNSGIIDAGASINVSVMLQPFD.................... 71
8 -12.300PF05753.14; Q9VUZ0_DROME/9-186; Translocon-associated protein beta (TRAPB)  ali follow..  18.....ARLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAAKVRLVDSGFHPEAFDVVGGQ-RIAPQTNFTHVLVVRPKAFGYFNAEVSYKAVEESE... 116
9 -12.200PF07705.11; Q8TPY5_METAC/349-453; CARDB  ali follow..  17................AKAWNKLNNTVSVTVINNGPENADSFALELYSDGTPVESRQVT-GLANGATETVDFSWKPEDIKDYTLKAVVVPGS...... 91
10 -12.000PF06280.12; C5AP_STRP1/597-707; Fn3-like domain  ali follow..  1.............VHLNN--VSDKFEVTVTVHNKSDKPQELYYQAALAPKALYETSWQKITIPANSSKQVTIPIDVSQFSKLEGFVRFKQDPTKEELM 106
11 -11.300PF06159.13; J3KCX7_COCIM/67-339; Protein of unknown function (DUF974 topsan)  ali follow..  16  6..............AFGSAYVGETFSCSLSANNEFLRGDASRVVTSIRILAEMQTPSQVVGIAQVESMQKIVRFDLKEEGNHVLAVGVS......... 96
12 -11.200PF12690.7; C4L5A1_EXISA/43-141; Intracellular proteinase inhibitor  ali follow..  15  2............DTEMAYDASAKTLSATISMTNPNEEAVDVTFNS--GSDYMFTESVIEEKWEANDKKVFDEVFPTLEPGEYSVEVIGLGQV...... 98
13 -11.000PF10633.9; Q67M97_SYMTH/263-339; NPCBM-associated, NEW3 domain of alpha-galactosidase  ali follow..  20  4.....................GRKNGVTLEVKNTGTTEITINFASTLPPNWTATFSPDSIALAPGESRQVTVEVTPALAGDYLVTLRARS........ 77
14 -10.600PF03896.16; B0XFI4_CULQU/3-291; Translocon-associated protein (TRAP), alpha subunit  ali follow..  10  71FLLFTRPLHSAGSGSQFELPAGYPVEFLVGFANKGSDDFIVETVEAS---QNFSAIAYNREIKPGHEATVSYSFLPSES................... 157
15 -10.200PF08626.11; C0NZX0_AJECG/5-1447; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit  ali follow..  22  823....................AEEPATFKVTLQNPFEFDVEIESLRIDGTGIPFEAAATHLWLAPFTTQEYYISGVAATEGTLE............... 886
16 -9.650PF06030.12; Q8Y9H6_LISMO/31-150; Bacterial protein of unknown function (DUF916 topsan)  ali follow..  15  2SVKAILPDNQASSVTYFDLQMKQKQTLKVEITNHSKEEITVNCVANTAVTNEVKESVSEVTLKPNETKIWTAAIQPAENGIILGGLHFQE........ 120
17 -9.320PF07919.12; C4JTF4_UNCRE/662-1266; Gryzun, putative trafficking through Golgi  ali follow..  12  504.................ASALPNFIHLDYTLENPSIHFLTFTITMEASDQFAFSPKSLAVQLVPLSRHTVRYNLLAAGNQKWI-QLMVVD........ 578

FFAS is supported by the NIH grant R01-GM087218-01
1 3 9 8 0 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.