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Query: PF15843.5; CC080_HUMAN/46-247; Domain of unknown function (DUF4719 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst CGERERCCDATNATAVRCCKLPLHAFLDNVGWFVRKLSGLLILLVLFAIGYFLQRIICPSPRRYPRGQARPGQRPGPPGGAGPLGGAGPPDDDDDSPALLRDEAAAGSQDSLLDSGGGGRGRGGGGRSDPSCASEHEMRVVSPVFLQLPSYEEVKYLPTYEESMRLQQLSPGEVVLPVSVLGRPRGGVAAEPDGGEGRYPLILast
1 -146.000PF15843.5; CC080_HUMAN/46-247; Domain of unknown function (DUF4719 topsan)  ali  100  1CGERERCCDATNATAVRCCKLPLHAFLDNVGWFVRKLSGLLILLVLFAIGYFLQRIICPSPRRYPRGQARPGQRPGPPGGAGPLGGAGPPDDDDDSPALLRDEAAAGSQDSLLDSGGGGRGRGGGGRSDPSCASEHEMRVVSPVFLQLPSYEEVKYLPTYEESMRLQQLSPGEVVLPVSVLGRPRGGVAAEPDGGEGRYPLI 202
2 -14.800PF15763.5; J9NSA7_CANLF/7-170; Regulator of human erythroid cell expansion (RHEX)  ali follow..  17  5..............................GLVIAVVSFILQACLFTAINYLLCRNMAKKSERILKGARLQAPGPGPAHRQPLAAQEETRSTPVSEPHYRHGSDTSSDSSN---------SSDNSDSSPQNCQATKDVNYTQVVF-SALDYENLKETTDY.......................................... 133
3 -13.300PF14979.6; TMM52_MOUSE/30-178; Transmembrane 52  ali follow..  16  3CDPSDQCPPQARWSSL---------------WHVGLILLAILLMLLCGVTASCVRFCCLRKQTHTQSHTPAAWQP---------------------------TVIPVDSDSPAHSTSYSSVQYPLGMRLPLYFGEPDPDSMVPPTYSLYASE-----PSYDEVVKMIK.................................. 130
4 -12.200PF15957.5; B4QL66_DROSI/113-224; Commissureless  ali follow..  21  2......................YDKFMNEV-WI------VFTLILISMVFCICSCFLYHQFRTWKRNYRNNANGSTQCTIVDIEALKLHPDVEDP----------------------------------------------------VPEYTLVSGLPSYEAALELLQKSPQSSCL.......................... 98
5 -8.980PF15823.5; CC70B_DANRE/11-249; UPF0524 topsan of C3orf70  ali follow..  17  111.........................................NIAELFIDDYIVKRIMCYVQR----PQAHVEPAQMNPIQKQHTEDKQIVEETVKGPKMGHCSSPSTSEDSGINALGEEESEEEDELSTDGHSSPGSLWDQDECTLLSPSKSMVEIIENIETTV...................................... 239
6 -8.680PF16118.5; R6SEF6_9BACE/2-95; Domain of unknown function (DUF4834 topsan)  ali follow..  10  1...............................FHILGFIFFFILIILVIGLAILSKVIRTRMKGDESTRYNRSGSASQDFAQSQNTTHENTRSNNTSEGRRKGKVFDEDEGEYVD------------------------------------FEEIK............................................... 94
7 -8.340PF05283.11; F6ZX51_ORNAN/2-123; Multi-glycosylated core protein 24 (MGC-24), sialomucin  ali follow..  24  68........TTPNATATPVTPSPRKSSFDAASF----IGGIVLVLGVQAVVFFLYKFCKSKERNYH......................................................................................................................................... 120
8 -7.890PF07172.11; Q8W157_BRAOL/1-88; Glycine rich protein family  ali follow..  19  3.....................................SKALVLLGLFALLFVISEVAATSEGQSLKSESEDTLQPDHSGGGGQGYNGGGGYNGRGGYNGGGHHGGGGYNG............................................................................................ 75
9 -7.880PF11770.8; H2R5K4_PANTR/1-155; GRB2-binding adapter (GAPT)  ali follow..  15  1.........................MSKSCGNNLAAISGISLLLLLVVCGIFLQR---KVCTKTFLSPRIIGLRHEISVETQDHKSAVRGNNIHDNYENVEAGPPKAKGKTDKELYENTGQSNFEEHIYGNETSSDYYNFQKPRPSEVPQDEDIYILP............................................ 154
10 -7.730PF13139.6; Q81VL6_BACAN/13-127; Domain of unknown function (DUF3981 topsan)  ali follow..  34  78...........................DQIGKLEGTLKGLLMFVLLASYGYFLHDIVISQTK............................................................................................................................................ 114
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.