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current user: public |
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Query: PF15875.5; G3IHE9_CRIGR/3-77; Domain of unknown function (DUF4731 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . | |||||||
# | Score | Template | Links and tools | %id | First | SQESGVHYSRWDNSSRDEVSMTAMSSTEEASCYRRLSQKLCSGKLGIAMKVLGGVALFWIVFILGYVTGYYVHKC | Last |
1 | -74.600 | PF15875.5; G3IHE9_CRIGR/3-77; Domain of unknown function (DUF4731 topsan) | ali | 100 | 1 | SQESGVHYSRWDNSSRDEVSMTAMSSTEEASCYRRLSQKLCSGKLGIAMKVLGGVALFWIVFILGYVTGYYVHKC | 75 |
2 | -8.430 | PF10791.9; Q75BR8_ASHGO/2-93; Mitochondrial F1-F0 ATP synthase subunit F of fungi | ali follow.. | 18 | 37 | ................KALPQGPAPVRQATGMIGKYRAKYFDGDNASGKPI---VHFAIFVLCLGYSMDYYFH.. | 90 |
3 | -7.690 | PF06003.12; F7AWW9_XENTR/27-291; Survival motor neuron protein (SMN) | ali follow.. | 37 | 231 | .......................................................SMLIAWYMSGYHTGYY.... | 246 |
4 | -7.170 | PF15843.5; CC080_HUMAN/46-247; Domain of unknown function (DUF4719 topsan) | ali follow.. | 12 | 2 | ...............GERERCCDATNATAVRCCKLPLHAFLDN-VGWFVRKLSGLLILLVLFAIGYFLQRII... | 57 |
5 | -6.720 | PF17093.5; Q9A3C7_CAUVC/1-138; Penicillin-binding protein N-terminus | ali follow.. | 22 | 26 | SASDGVSQDPWAPQGPDPFRLSSAAAKKKARKWGWVWGTLLVGFLLAVLSVAGGGAYVWFKYL............ | 111 |
6 | -6.480 | PF03234.14; N1JM37_BLUG1/3-137; Cdc37 N terminal kinase binding | ali follow.. | 17 | 1 | .....LDYSKWDNELSDDSDIEVHPNVDKKSFIRAKQHQIHQQRFQRKKEI........................ | 47 |
7 | -6.430 | PF11631.8; YXEF_BACSU/19-141; Protein of unknown function (DUF3255 topsan) | ali follow.. | 15 | 11 | .EETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMAYKVISQST--IQYLGPYYPLK. | 86 |
8 | -6.180 | PF12388.8; H8MF84_CORCM/49-254; Dual-action HEIGH metallo-peptidase | ali follow.. | 11 | 70 | ..GLRLTFRGPTTGCTANISAETTTGTGGQAGFPSNGMPYGVFYITGLDSYSADVNEHVITHELGHAIGFR-HS. | 140 |
9 | -6.130 | PF11239.8; C7MBE6_BRAFD/1-83; Protein of unknown function (DUF3040 topsan) | ali follow.. | 10 | 12 | ...DEMERQLFADDPRLARAFAPTKQPRRSRSGRRILIGLGAVIVGLGVLVLAVSLPAVWLGVIAFIG....... | 76 |
10 | -6.110 | PF07123.12; C6SYI0_SOYBN/1-132; Photosystem II reaction centre W protein (PsbW) | ali follow.. | 11 | 63 | ..................LLAAAVAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALY.... | 115 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5. |