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current user: public |
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| Query: PF15890.5; H8KWF8_SOLCM/38-273; Putative zinc-binding metallo-peptidase, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . 150 . 160 . 170 . 180 . 190 . 200 . 210 . 220 . 230 . | |||||||
| # | Score | Template | Links and tools | %id | First | ETWTKTDLDIWIEQQLGIPYNIEAKYRWDKNEVKPNKSFIPPDTASVREVFNVLINGMIDPYVENVGSYFVKTYLPRQYVIVGSYEWNSNQTITLGTAEGGRKITLYGIRNYVAANDQGLTRQLLHTLHHEFAHILHQNIMYPKEFKTITGSEYSADWNNLSLAEAYQKGFISQYSRSNPDDDFVEMVSIMLVNGKDWFEALLASDKTNADSRALLRRKEAIVRNYFRDVYKVNFD | Last |
| 1 | -105.000 | PF15890.5; H8KWF8_SOLCM/38-273; Putative zinc-binding metallo-peptidase | ali | 100 | 1 | ETWTKTDLDIWIEQQLGIPYNIEAKYRWDKNEVKPNKSFIPPDTASVREVFNVLINGMIDPYVENVGSYFVKTYLPRQYVIVGSYEWNSNQTITLGTAEGGRKITLYGIRNYVAANDQGLTRQLLHTLHHEFAHILHQNIMYPKEFKTITGSEYSADWNNLSLAEAYQKGFISQYSRSNPDDDFVEMVSIMLVNGKDWFEALLASDKTNADSRALLRRKEAIVRNYFRDVYKVNFD | 236 |
| 2 | -22.200 | PF15887.5; L0DUU9_THIND/101-352; Putative zinc-binding metallo-peptidase | ali follow.. | 12 | 6 | ............................................QTLESQKRRLVYSLIRLGLPVQPKYRDPAGLAFDFLADSEPSFRETGAVMTGHANGLITLNIAEADERMRRDMAEPYRTILGHFRHESGHYYWDRLVRDGEVRAVFGDDYTQAHHARGARADWQQRHVSAYASSHPWEDWAETWAHYLHIVDTLDTAR---------HFGVTVGNGLDETGSPQTAPAFD.. | 200 |
| 3 | -11.700 | PF06167.12; B8FEI0_DESAA/5-251; Glucose-regulated metallo-peptidase M90 | ali follow.. | 8 | 23 | ..RQNVAYYSMLKAEERVKLHALIQVFVAEKNWEGAGELELTDEIRVTIAAQACLLLL--QSIIVYPSTVTPPQRKRS---FESSPTSVEAPQPILGQAFKGGPVILCWDAGLRGGRNSEDGH--NLVYHEFAHKLDMLDGAADDWVQVCSEEFLR----KKNAKNGRKSFLRSYGAVNEAEFFAVATEQFFEQPQK------------------MVEHAPELYRVLKEYYR.... | 247 |
| 4 | -9.660 | PF01752.17; Q87Q10_VIBPA/316-600; Collagenase | ali follow.. | 8 | 29 | SEYGICDFETKLKGLVLSQT-----YTCSPTIRILSQNMTQEQHVAACSKMGYEEGYFHQSLETGEQPVADDHNTQLQVNIFDS-DYGKYAGPIFDISTNNGGMYLEGDPSVAYEASYANPDHFVWNLEHEYVHYLDGRFDLYGGFGHPTE---------------WSEGIAEYIANEKDNQAALDTIR---DGSTYTLSEVFETTYDGFDVDRIYRWGYLAV-RFMFERHKDDVN | 253 |
| 5 | -8.470 | PF07737.11; LEF_BACAN/69-286; Anthrax toxin lethal factor, N- and C-terminal domain | ali follow.. | 8 | 110 | .............................................................................................................................LNVYYEIGKILSRDIQPYQKFLDVLNTIKNASDSDGQDLKEHPTDFSVEFNSNEVQEVFAKAFAYYIEPQHR----------------DVLQLYFNYMDKFNEQEIN.... | 218 |
| 6 | -8.210 | PF13485.6; Q3Z8Y5_DEHM1/164-406; Peptidase MA superfamily | ali follow.. | 11 | 2 | ..........................................................AQAALVRLAADTAELKDKVTLYIYAN--SSDLQSAMVFPAEWTGGVAYTDFNVIAIGIASYDIDWGKRAITHELAHKVTGQITSNPVWLNEGISMYAEGNLEAVYVNYLIWAINQSYAES------FTLVNYLITNGSEKFSDLLETFSHGAGYDEALLAVYGFDIQGLNTKWQAALK | 200 |
| 7 | -7.490 | PF10463.9; LIT_ECOLI/61-258; Peptidase U49 | ali follow.. | 8 | 97 | ..............................................................................................................................ILHHEISHVVLQHPLVTTA----------FSTQEEREADSHATKWILG-NLYESAPELKKRALGIATAVLCIQSLEVENYFCLQNTHPAAYERIYSNISCYPVG...... | 189 |
| 8 | -6.880 | PF08331.10; D5ANY6_RHOCB/54-130; Domain of unknown function (DUF1730 topsan) | ali follow.. | 15 | 20 | ........................................................................................................................................................SYTPEVDPREATRQPGHGAISVYAQG---KDY----------------------------HDLVKRRLKRLGRWLIENSPVD.. | 76 |
| 9 | -6.760 | PF16286.5; R5UME6_9BACE/21-343; Domain of unknown function (DUF4932 topsan) | ali follow.. | 11 | 97 | .RWTEESFRTFVLNDFYRQTKFKDFYT--------------LHRGLYDIAETRLNTILVDLNAEWFKSMFGEGPENTIVVAS----CNGPGNYAFNGITKGEKRGIVIGCSTDKEGNPAYSRFLITVIVHELLHHYTNPC-LAQYWSQIDS--ASQIIYPHVKEKMAKLAYGSTNSTMI--EWFNNLLTIMYFKDNPNRGFTATHLTAWRQHEGFIRNLYSTIKDFMPE....... | 319 |
| 10 | -6.500 | PF06114.13; Q9JXJ6_NEIMB/148-274; IrrE N-terminal-like domain | ali follow.. | 8 | 34 | ...................................................................................................................NTQKSAERSRFDAAHELGHLIRDK----------------------YSMEHSKNSEITEDEPRDIIEKEANAFASAFLMPEAALRLYRHV-PITIENLLKIKRRFGVSLVAL......... | 122 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Slabinski L, Wooley J, Deacon AM, Lesley SA, Wilson IA, Godzik A. Genome pool strategy for structural coverage of protein families. Structure. 2008 Nov 12;16(11):1659-67. |