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Query: PF16116.5; R6Y5S7_9BACT/235-498; Domain of unknown function (DUF4832 topsan), from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst RISFHDDFIVIKKHQWDGGMSEGTPAYEQIVRESPCFPVDGELPWGTWSMNEDPDNPEAGWIIDGLQTARRLFLQHFTSLSVIHNYKEKNTKDKYSMMYWKETPVSTEFLRENKMPVSDGYFIRKDGSVAERNVFDYIRDHLGYRIELQEMTAPAVLLAGQANPVEISLINRGFSTLFNEHPVYLVLIDESGKVCHVALTDANVNDWQPYETGDSSCTPLLHTISTDLQIPLGLAKGMYSLGLWIPDGSARLQYDNRFAIRCANLast
1 -92.500PF16116.5; R6Y5S7_9BACT/235-498; Domain of unknown function (DUF4832 topsan)  ali  100  1RISFHDDFIVIKKHQWDGGMSEGTPAYEQIVRESPCFPVDGELPWGTWSMNEDPDNPEAGWIIDGLQTARRLFLQHFTSLSVIHNYKEKNTKDKYSMMYWKETPVSTEFLRENKMPVSDGYFIRKDGSVAERNVFDYIRDHLGYRIELQEMTAPAVLLAGQANPVEISLINRGFSTLFNEHPVYLVLIDESGKVCHVALTDANVNDWQPYETGDSSCTPLLHTISTDLQIPLGLAKGMYSLGLWIPDGSARLQYDNRFAIRCAN 264
2 -12.000PF10633.9; Q67M97_SYMTH/263-339; NPCBM-associated, NEW3 domain of alpha-galactosidase  ali follow..  14  1............................................................................................................................................................AVAGRKNGVTLEVKNTGTTEITG-----INFASTLPPNWTATFSPDSIDALAPGESRQ---------VTVEVTPNSKALAGDYLVTLRARS................. 77
3 -11.700PF15418.6; Q5LII3_BACFN/21-149; Domain of unknown function (DUF4625 topsan)  ali follow..  15  27...........................................................................................................................................................RIGSSHGVHFEMNLHNEAIA------SYKINIHNNFDGHSHTRASEAGITK-FERTYTDKAGQKDAYVHNHDIKIPADATPGNYHLMVYCLDQSGNETYVV........ 124
4 -11.500PF12245.8; W8CUG4_RAOPL/139-263; Bacterial Ig-like domain  ali follow..  16  14..............................................................................................................................................GYEMVTQGDRWELGLGAEQKLYVNVN-AATGFD------KATLQVINPDNSVYSITDMDYD------GGSSSLSAPWTLGERKKASWMPTSDADVEFRFRVTLYDKAGSRKVLPDQKFVFDN 125
5 -10.800PF11906.8; K4KQ67_SIMAS/332-474; Protein of unknown function (DUF3426 topsan)  ali follow..  16  27...................................................................................................................................RPYYQAFCPLLG-KVLASNLVVRSHPRLKDALLIDAVLLNK--AAFQQPFPLQIQFSDLQGKPVASRRFT--PREYLGGELAGQTIMPSNQPIHIELEIDPGPEAVNYSA....................... 143
6 -10.500PF16408.5; R6U353_9BACE/1-123; Domain of unknown function (DUF5016 topsan)  ali follow..  9  36..................................................................................................................................................EMTIESCATEAFMGDSVRFSIKLNDEF--------TLKAKLLFDGTSV---------------SDLTIRTKTYGTYDAAIFVPLLKDIPDGTAEITFTAQNTGLGITE.......... 123
7 -10.400PF12690.7; C4L5A1_EXISA/43-141; Intracellular proteinase inhibitor  ali follow..  15  6..........................................................................................................................................................AYDASAKTLSATISMTNPNEEAVDVTFRFQLVVKKGDQTV-YMFTESVIEEKWEANDK-----------KVFDEVFPLTLEPGEYSVEVIGLGQVD.............. 99
8 -10.200PF14524.6; Q888F1_PSESM/301-441; Wzt C-terminal domain  ali follow..  11  2..........................................................................................................................................EYRWGFHMSASGREFPNSVESGEEIVLDLALQ---FNSTVVNPIIGFTIKTKEGVTVY------GTNSYMQDCEGTGLIGNAGNQAKARVKFRNALATGDYFISIGIASRQSE............. 113
9 -10.200PF05753.14; Q9VUZ0_DROME/9-186; Translocon-associated protein beta (TRAPB)  ali follow..  12  19................................................................................................................................................RLLVSKQILNKYLVEKSDLLVRYTIFNVGSGAATK-----VRLVDPEAFDVVGGQPTAVVDRIAPQTNFTHVLVVRPKA------------FGYFNFTAAEVSYKAVEESETL....... 118
10 -9.110PF01835.19; Q025N0_SOLUE/291-387; MG2 domain  ali follow..  13  1.............................................................................................................................................MGYIYTDRPV-----YRPGHTVHFKLRQRTAAGYTVPAGKQLEVEVQDAEQKPVFRKTLTAT----------------ANGTVRDEFTLAPSSALGSYSINVRSGEEN............... 89
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.