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current user: public |
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Query: PF16339.5; Q8Y460_LISMO/1-79; Domain of unknown function (DUF4969 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . | |||||||
# | Score | Template | Links and tools | %id | First | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDD | Last |
1 | -50.700 | PF16339.5; Q8Y460_LISMO/1-79; Domain of unknown function (DUF4969 topsan) | ali | 100 | 1 | MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVDDPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDD | 79 |
2 | -10.300 | PF16408.5; R6U353_9BACE/1-123; Domain of unknown function (DUF5016 topsan) | ali follow.. | 17 | 1 | MNK-ILKTMALLAVPATVAVSCKDDGMDVKFTDKG............................................ | 34 |
3 | -9.390 | PF02402.16; A8ARS6_CITK8/1-49; Lysis protein | ali follow.. | 20 | 1 | MKKVKVVFLFILIFSGFLLVACQANYIRDVQGGTVAPSSSSELTGIAVQ.............................. | 49 |
4 | -8.380 | PF12273.8; K1X614_MARBU/45-169; Chitin synthesis regulation, resistance to Congo red | ali follow.. | 11 | 1 | ...RWVALILVVIFFLLMGYLFSITRRRRQRGLAPMYGTGWIPGTGPKPPQGQWADGRNGGPSH............... | 61 |
5 | -8.150 | PF14466.6; R6Y7E1_9BACT/10-135; PLAT/LH2 and C2-like Ca2+-binding lipoprotein | ali follow.. | 14 | 2 | .........IVALFLGLILVSCSDDDDQGGVIDTGIHKIVVEQS................................... | 36 |
6 | -8.030 | PF11685.8; Q5NHH2_FRATT/4-270; Protein of unknown function (DUF3281 topsan) | ali follow.. | 24 | 1 | ..KKKLLIGTAILSSAAILGSCGKSETATENTANDLCKFELTDALVSRYTNLLGKT....................... | 61 |
7 | -7.980 | PF09710.10; Q73QM8_TREDE/4-414; Treponema clustered lipoprotein (Trep_dent_lipo) | ali follow.. | 9 | 3 | ......SKLIFILMLAVLLFSCSKEVKEQKLVEAKVESSIKIEPKENEFLSKPEYNTHVKSPEQIKELEEKYKRSKAYE | 75 |
8 | -7.940 | PF16341.5; R5U6I7_9BACE/2-141; Domain of unknown function (DUF4971 topsan) | ali follow.. | 21 | 1 | MKKK-LLFILSLTFIGISCFACLDDETKYVTQKKTNYPLAVAVNNVQTGTTSYYHGKIDQT.................. | 63 |
9 | -7.780 | PF16027.5; E2BLF4_HARSA/131-331; Domain of unknown function (DUF4786 topsan) | ali follow.. | 16 | 137 | .......................DFVSNGKPTSIYQWQANLKRPDASLNSLDLGPYNFNGKPTGLYLLGPDGSSAMHQS | 192 |
10 | -7.730 | PF01060.23; G0PM28_CAEBE/34-110; Transthyretin-like family | ali follow.. | 8 | 6 | .....................CDGQPAENVLVKLYEDGTVWDTKLDSVRTAFDGTFRVSGHYTKIFDMD.......... | 53 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Li W, Pio F, Pawlowski K, Godzik A. Saturated BLAST: an automated multiple intermediate sequence search used to detect distant homology. Bioinformatics. 2000 Dec;16(12):1105-10. |