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Query: PF16493.5; F6QR90_ORNAN/96-181; N-terminal of Homeobox Meis and PKNOX1, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .
# Score Template Links and tools%idFirst GSECITSASFDVDIENFVRQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGLast
1 -67.000PF16493.5; F6QR90_ORNAN/96-181; N-terminal of Homeobox Meis and PKNOX1  ali  100  1GSECITSASFDVDIENFVRQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLG 86
2 -6.630PF03821.16; H0V9D9_CAVPO/28-261; Golgi 4-transmembrane spanning transporter  ali follow..  16  2......................................VVMSVLLFIEHAVEVSHGKASCRLPKTLYLR................. 32
3 -6.260PF15865.5; G3UTA2_MELGA/150-502; Fanconi anaemia group A protein N terminus  ali follow..  20  278......SEWFKASFGNASSHHGSSKKALVFLFEFLSELVFEVAPYLKVHIMYPPFVPTKHRSVLLEYITLAKTRL........... 347
4 -6.010PF04397.15; Q8ESY8_OCEIH/245-344; LytTr DNA-binding domain  ali follow..  23  49..........................................FRCHRSYIVNLQKVREVITWTRNSYSLVLQDKEKTQVPLSKA.. 90
5 -5.940PF00523.18; FUS_HENDH/29-509; Fusion glycoprotein F0  ali follow..  17  427........DISSQISSMNQSLQQSKDYIKEAQKILDTVNPSLISMLSMIILYVLSIAALC.......................... 478
6 -5.930PF15393.6; U3IEE0_ANAPL/93-228; Domain of unknown function (DUF4615 topsan)  ali follow..  20  1........QLWKEVDWCAEQLELGLKTQKSTPKQAEEAL-RAIKTLRNDKAPLVKKRQVMRTLFGDY----RKKMEEE........ 65
7 -5.800PF06327.14; H0ZQL1_TAEGU/473-568; Domain of Unknown Function (DUF1053 topsan)  ali follow..  11  34.................LPNHLAQALHVQSGPEEINKRIEHTIDLRSGDKLRREHIKPFSLMFKDSSLEHKYSQMRDEVF...... 96
8 -5.800PF18233.1; S6F3A2_ZYGB2/540-649; Cdc13 OB4 dimerization domain  ali follow..  14  9.....SNALYKLDARILLIARSEDRVELLVTNDIIADRFVDPKRILRIEILGHENLRHFTAS........................ 65
9 -5.770PF13225.6; D8TTN5_VOLCA/79-167; Domain of unknown function (DUF4033 topsan)  ali follow..  18  26........................................SVVQIKKCRYLESSGCVGMCVNMC---------KIPTQTFFTDEFG 62
10 -5.470PF10752.9; D3FXJ5_BACPE/1-83; Protein of unknown function (DUF2533 topsan)  ali follow..  13  2........SVHLQIAEQVTNHRRAQKEFLALDEKREAAIDRVVEDAKISLNEVNAITKEMNQIAQDFYFPPRKEVTTDMVRE.... 79
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;