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Query: PF16629.5; G1N4L7_MELGA/523-813; Armadillo-associated region on APC, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst NRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASHRNKQRHKQNVYSEYVLDSNRHDDGVCRTESFSTGNVTVLSPYLNSTVLPGSSSSSRGNIENCLSEKDRSLDRDRAVGLNAYHPATENSGNSSKRVGMQISTAAAQIAKVMEEVTSMHIPQEDRGSSSPSEMHCLTEDRNTTRRAASAHTHSNTYFPKSENSSRPCPVPYTKMEYKRASNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIHSANHMDDNDGLast
1 -106.000PF16629.5; G1N4L7_MELGA/523-813; Armadillo-associated region on APC  ali  100  1NRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASHRNKQRHKQNVYSEYVLDSNRHDDGVCRTESFSTGNVTVLSPYLNSTVLPGSSSSSRGNIENCLSEKDRSLDRDRAVGLNAYHPATENSGNSSKRVGMQISTAAAQIAKVMEEVTSMHIPQEDRGSSSPSEMHCLTEDRNTTRRAASAHTHSNTYFPKSENSSRPCPVPYTKMEYKRASNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIHSANHMDDNDG 291
2 -8.080PF02405.16; K9WIJ8_9CYAN/42-253; Permease MlaE  ali follow..  25  51........AFCRELAPILTASIVQVGSAYAAEIGAMQISEQIDALYMLKTDP............................................................................................................................................................................................................................................... 96
3 -7.580PF15258.6; W5M6D4_LEPOC/27-550; Protein family of FAM222A  ali follow..  19  3.......DTTQKMRSAQYPTLDAYAKKVANNPLQRKHVRRTVNGLDTSGQRYSP............................................................................................................................................................................................................................................. 64
4 -7.310PF08192.11; SSY5_YEAST/2-693; Peptidase family S64  ali follow..  7  1......................VR---GLNKKKNEEKENTDLPADNEQNAAETSSSNVSGNEERIDPNSHDTNPENANNDDASTTFGSSIQSSSIFSRGRMTYGTGASSSMATSEMRSHSSGHSGSKNSKNLQGFKDVGKPLRAVSFLSPVKEEESQDTQNTLDVSSSTSSTLATSENARENSFTSRRSITLEYIHKS............................................................................................. 175
5 -7.080PF14963.6; H3DF96_TETNG/13-269; Calcium signal-modulating cyclophilin ligand  ali follow..  8  1........SAAQKRAE------IRRRKLLMN--SEERMNRIVGCTTNSSENHEPRFHLDLDRTEPVSSSSSPKRSSAHGSRSHSATPERRASPLPGFSESLGGSLEDDLAGIRKRTRGDRVSDDLNSSARPGLQKYLSRFDDAMKLRGQLASEKPVQDR.................................................................................................................................... 143
6 -7.020PF13388.6; A2GXF0_TRIVA/1-420; Protein of unknown function (DUF4106 topsan)  ali follow..  29  2.........................QKAMKAEIKANN-----DWLDAQANAKAAQ............................................................................................................................................................................................................................................ 28
7 -6.780PF15385.6; F7CPU0_CALJA/33-561; Specifically androgen-regulated gene protein  ali follow..  21  6...............SSYDFLSAEEKECL--------LEETIGSLDTEADSGLSADES......................................................................................................................................................................................................................................... 42
8 -6.690PF04417.12; E3D9Q9_GARV3/48-176; Protein of unknown function (DUF501 topsan)  ali follow..  11  8GRPLAVITRPCLEDGTPFPTTC----------LTSPEAVKAASHLEAQGFMKECNNLLNNDNDVAKKYEQAHKYYLEFR.................................................................................................................................................................................................................... 77
9 -6.620PF05884.12; A0A2H2IWJ2_CAEJA/19-303; Interactor of ZYG-11  ali follow..  15  1..................PALLANGQEAGRAGIHLRELEQFPIESKKLMEQVLSSVSSVNMATAASTRGSRSEASQDSFVRIVNTIADISPSKLPSKA................................................................................................................................................................................................. 91
10 -6.530PF07229.12; VIRE2_AGRFC/1-556; VirE2  ali follow..  15  3..................P-------KA---EGNGENITETA-NVETSDFVNLKRQKREGVNSTGMSEIDMTGSQETPEHNMHGSPTHTDD........................................................................................................................................................................................................ 66
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Schwarzenbacher R, Godzik A, Jaroszewski L. The JCSG MR pipeline: optimized alignments, multiple models and parallel searches. Acta Crystallogr D Biol Crystallogr. 2008 Jan;64(Pt 1):133-40. Epub 2007 Dec 5.