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Query: PF16912.5; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst APMGFLVEPISITEKAIQHARATRSAFDWQPASALVLGTGSLGLLTAAMLTETLEYDRVYCLGRKDRPHPTIDIVDRLGATYIDSRETPVSEIPAAYEPMDLVYEATGYAKHAFEAIEALAPNGVAALLGVPEDWAFEVDGGHLHRELVLSNKALVGSVNSNRGHFEAAIDTLSALPDWVLTEVVSGVYDLAALERAFPEVTAPVAATGGSTVSPDDDTTIKTAVEFLast
1 -81.700PF16912.5; I7BJ28_NATSJ/144-370; Glucose dehydrogenase C-terminus  ali  100  1APMGFLVEPISITEKAIQHARATRSAFDWQPASALVLGTGSLGLLTAAMLTETLEYDRVYCLGRKDRPHPTIDIVDRLGATYIDSRETPVSEIPAAYEPMDLVYEATGYAKHAFEAIEALAPNGVAALLGVPEDWAFEVDGGHLHRELVLSNKALVGSVNSNRGHFEAAIDTLSALPDWVLTEVVSGVYDLAALERAFPEVTAPVAATGGSTVSPDDDTTIKTAVEF 227
2 -30.900PF00107.26; ADH_SULSO/182-311; Zinc-binding dehydrogenase  ali follow..  19  2.........................................LGTMAVQIAKAVSGATIIGV----DVREEAVEAAKRAGADYINASMQDPLAEITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA-----DLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEA.................................................... 130
3 -20.000PF13602.6; B7KCY1_CYAP7/190-331; Zinc-binding dehydrogenase  ali follow..  18  1.............................................................................FGADYILYTQTDFSAAATEGKGVDVAFDTVG-GKTFFDTVPAVRVYGDLVTILEPDGSKGTLKVARNRNLRISLELMLTPALMGLREAQEHQTEILSQIDEGKLNIHLSQTYPLADAVEAHKQVETGSTTGKVAL............... 142
4 -12.800PF13847.6; B2J9C6_NOSP7/55-253; Methyltransferase domain  ali follow..  16  3.............................KEKVILDAGCGT-GYKSLVLAEANPGAKIVGIDISEESIKLAQQRLEHHGFDNAEFHVLPIQELPKLNYQFDYIN-FPDLAAALQGMISVLKPNGIIRS................................................................................................... 106
5 -12.400PF03059.16; A3DUI9_MALBX/3-277; Nicotianamine synthase protein  ali follow..  14  106.................LEFNILSQHFTRMPIKIAFVGSGPLPLTSIVLASNHLTKTSFDNY---DINASANSKALGL-SKRMVFHTTDIMDVTTALKDYEIVFDKMEKLKIIDHLAKYMAPGATLML................................................................................................... 226
6 -11.500PF00670.21; SAHH_DICDI/191-351; S-adenosyl-L-homocysteine hydrolase, NAD binding domain  ali follow..  14  23..............................GKVAVVAGYGDVGKGCAQSLSKMGARVLVT-----EIDPINALQACMDGYQIVTMETAAPLS--------NIFVTTTGCRDIVGEHFAVMKEDAIVCNIG................................................................................................. 110
7 -11.000PF01262.21; Q9S227_STRCO/141-353; Alanine dehydrogenase/PNT, C-terminal domain  ali follow..  17  30................................RAVVIGGGVSGWNAAQIAIGLGFHVTLL-----DKDITKLREADKIFGTKIQTVVSNAFELEKACLEADLVIGAVLIPGVTNELVSRMKPGSVLVDIAIDQGGCFEDSHPTTHAEFPVHNSVFYCVANMPGAVPNTSTYALTNATLPYIVELADR........................................ 187
8 -10.600PF01488.20; HEM1_PSEAE/169-304; Shikimate / quinate 5-dehydrogenase  ali follow..  19  11.............................HRSQALLIGAGETITLVARHLFEQGVKRIVVA---NRTLERASLLAEQFGAHAV-----LLSEIPEELANSDIVISSTASQLPI-ERALKQRKHKPMFMVDIAVPRDIEPEVG..................................................................................... 120
9 -10.600PF01135.19; PIMT_CAEEL/8-220; Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)  ali follow..  16  50...ATVSAPHMHAA-----ALDYLQNHLVAGAKALDVGSGS-GYLTVCMAMMVGRNGTVVGIEHMPEKNIRKHHSEQLERGNVIIIEGDGRQGFAEKAPYNAIHVGAASKGVPKALTDQLAEGGRMMI................................................................................................... 174
10 -10.500PF00056.23; MDH_CHLAA/3-142; lactate/malate dehydrogenase, NAD binding domain  ali follow..  13  1...............................KKISIIGAGFVGSTTAHWLAAKELGDIVLLDFVEGVPQGKALDLYEASPIEGFDVRVTGTNNYADTANSDVIVVTSGAPRACISQAAPLSPNAVIIMV----NNPLDAMTYLAAEVSGFPKERVIG...................................................................... 140
11 -10.400PF09243.10; Q2YRR8_BRUA2/49-320; Mitochondrial small ribosomal subunit Rsm22  ali follow..  17  12........PATYAAVRASLDSAAESCPEFAPQSMLDVGAGP-GTALWAAKQCWPELQSATMIEASPIRAVGSDLARHSGLTMLDWRAGDVVRERLEFPYADLVTELAPDEREKLIERLWASARQMFVIV.................................................................................................. 138
12 -10.300PF00044.24; Q8KCE2_CHLTE/4-104; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain  ali follow..  22  2................................KVGINGFGRIGRLVFRQAMENPEIEIVGINDLTDVKTLAHLLKYDSGRTIAICAQKDPAQLPWASLGATLVVESTGI...................................................................................................................... 97
13 -10.200PF01269.17; A8M8R8_CALMQ/9-236; Fibrillarin  ali follow..  12  62....................NKLEAMPISEGSKVLYLGAAS-GTTVSHVSDIVGLNGLIYGVEFSPRVFREFQNIIDQGRLNVIPILADARYPEQYISLVKGVDQPFQAKILADNADVYLVKGGYIILV.................................................................................................. 177
14 -10.200PF01861.16; Q8U1U4_PYRFU/105-348; Branched-chain polyamine synthase A C-terminal domain  ali follow..  13  30...............TVARVILMHTRGDLENKDIFVLGDDD---LTSIALMLSGLPKRIAVLDIDERLTKFIKAANEIGYEDIEIFTFDLRKPLPDYHKFDTFITLEAIRAFVGRGIATLKGPRCAGYFGITRRESSLDKWREIQKLLLNEFNVVITDIIRNFNEYVNWWKLIPIKKLPEYNWYKSYMFRIETLEGS.............................. 224
15 -9.910PF03435.18; Q94BZ0_ARATH/41-165; Saccharopine dehydrogenase NADP binding domain  ali follow..  21  1.................................VLVLGGGRVGGSTATALSKLCPELKIVVGGRNREKGEAMVAKLGENSEFSQVDINDAKMLETSLRDVDLVVHAAG....................................................................................................................... 76
16 -9.860PF01113.20; DAPB_VIBCH/2-125; Dihydrodipicolinate reductase, N-terminus  ali follow..  12  2................................RIAIAGAGRMGRNLVKATHQNPLSELGAGSERPESSLVGVDIGELCGIGKQGIVLVDNLEQAVE--QFDVIIDFT-APASTLANLALCEQHGKKLVIGTTG.............................................................................................. 100
17 -9.820PF02670.16; DXR_PARUW/4-128; 1-deoxy-D-xylulose 5-phosphate reductoisomerase  ali follow..  17  1.................................IAILGSGSIGKNTLQVARHLKERIKVVAIAARENIDLLEAQSKEFCPDIIAVFNNAKAYELQKRSEADLVISAMTGTMGLQPTIEAIKAGKDVGLAN................................................................................................. 117
18 -9.260PF13649.6; D8K355_DEHLB/33-128; Methyltransferase domain  ali follow..  10  1.................................VLDVCCGT-GDQAIRLAEQ---GIEVHGIDLNGSMATAESHKRRAGLDNVSFGQADASALLFPNRSFDYATTSLALLQVLEEMRRVVKKGG....................................................................................................... 96
19 -9.170PF06080.12; Q8YZS2_NOSS1/8-210; Protein of unknown function (DUF938 topsan)  ali follow..  10  5..........PATQRNREPILEVLLQVLPASGTILEIASGT-GEHAIFFAPRLKPRKWLPS----DPNPELRASITAVELDASQPIWSVERDAILQDAPIAAIVNISACLGLLAGAGRILPPGGILYLYG................................................................................................. 140
20 -9.120PF05401.11; Q98A39_RHILO/5-200; Nodulation protein S (NodS)  ali follow..  18  41...............................ANALEVGCAA-GAFTERLAPICQRLTVI------DVVEPAITRARL-ETPHISWIISDVQQFSSD-ELFDLIVDLVQIRAAVRNLVGLLAPGGQLVF................................................................................................... 140
21 -9.070PF05221.17; D9SB20_FIBSS/15-498; S-adenosyl-L-homocysteine hydrolase  ali follow..  12  226SVTKSKFDNLYGCRHSLIDGINRATDVMMAGKIAVVCGYGDVGKGCAQSLRGQGARVIIT-----EIDPICALQAAMEGYEVKTLDEV---------SYADIFVTTTGNTGIISAQMEKMKNRAIVGNIG---HFDNEIDMAGLKKIPGIKRNEIKPQYDEWIFADGHSILVLAEGRLLNL.............................................. 391
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.