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Query: PF17191.4; A8F350_PSELT/110-273; RecG wedge domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EIKYAKRVGPRKEAILKKLGISTLGDLIFYFPRDYEDRRKIIPISEISFEGKLTTRGKVVNVETKKIGSMTITAAVLADGVSQLLLKWFNQEYLHKGLQVLKNKTIYATGLVKHSQFGGIEMVNPEIEPEDGTQVLEILPIYPLTHGISQKEIRRIVRENISCVLast
1 -93.000PF17191.4; A8F350_PSELT/110-273; RecG wedge domain  ali  100  1EIKYAKRVGPRKEAILKKLGISTLGDLIFYFPRDYEDRRKIIPISEISFEGKLTTRGKVVNVETKKIGSMTITAAVLADGVSQLLLKWFNQEYLHKGLQVLKNKTIYATGLVKHSQFGGIEMVNPEIEPEDGTQVLEILPIYPLTHGISQKEIRRIVRENISCV 164
2 -14.200PF11731.8; B3ENR7_CHLPB/7-91; Pathogenicity locus  ali follow..  33  7KLTDLPNIGPAIAADLRLLGINNPDDL......................................................................................................................................... 33
3 -11.900PF17244.2; A0A078HC14_BRANA/408-638; Cell division control protein 24, OB domain 3  ali follow..  8  1.............................................DCRDKTTISLYGVVTDILCDPNATGVVFSLKIEDTTGAIWARLHFNS-YWSLGRLGLGHVVYVSGLSCKTTKENCLEVL------EGNEKATFINLSCLPAFLTSSCLHKVST...... 109
4 -11.800PF04994.13; Q7MJ56_VIBVY/114-195; TfoX C-terminal domain  ali follow..  33  4RLKDLPNLRLATERMLKKAGIETVEQL......................................................................................................................................... 30
5 -10.300PF04076.13; YGIW_ECOLI/25-127; Bacterial OB fold (BOF) protein  ali follow..  16  23......................................TTVESAKSLRDDTWVTLRGNIVERISDD-------LYVFKDASGTINVDIDHKRW--NGVTVTPKDTVEIQGEVDKD................................................. 90
6 -10.300PF13742.6; B0TEJ1_HELMI/5-100; OB-fold nucleic acid binding domain  ali follow..  17  2......................SVTQLNTYIQGLLEAAPRLTDL---------WVQGEISNFKHHTSGHMYFT---LKDRESVVKAVMFRGKNRCLSFRPENGLKVILRGQVSVYPDGIYQIYAEEME.................................... 96
7 -10.100PF14229.6; C7RPT7_ACCPU/9-129; Domain of unknown function (DUF4332 topsan)  ali follow..  21  54DLARIKGVSGVYSDLLEKAGVDTVKELATRRPDNLHAK.............................................................................................................................. 91
8 -9.430PF16100.5; I3IYQ1_ORENI/15-142; RecQ-mediated genome instability protein 2  ali follow..  10  38..................................................SLVWMQGTVLEVQQDRD------TVLLMDETGTFVVQGVNNI--KGKPCLSQGKYVMVMGIIQAVS-PEPVIRAVKMADLSELA.............................. 113
9 -9.050PF02760.15; I3N161_ICTTR/202-369; HIN-200/IF120x domain  ali follow..  6  73..........NDVSVVSEAGLDQKFEVPSSVIKRANETPKIDHLHKQAPGTLVYGLFMLHTKKVN----KKNTIYEIQDNTGKIEVLGSGK---WHNIQCDEGNKLRLF....................................................... 164
10 -8.990PF11948.8; F9ZZG9_METMM/15-138; Protein of unknown function (DUF3465 topsan)  ali follow..  16  11...............................PYSASDTALQQAFRSHRSDLRIDGEGVVIKLLPDDNHGSRHQRFILRLRTGQTLLIAHNIDLAPKIENLRVGDTVSFYGEYEWSEKGGT............................................ 99
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 0 9 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Rychlewski L, Ye Y, Jaroszewski L, Godzik A. Integrated web service for improving alignment quality based on segments comparison. BMC Bioinformatics. 2004 Jul 22;5(1):98.