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Query: PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan), from PfamA32U |
. 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 | |||||||
# | Score | Template | Links and tools | %id | First | LKFIGLVQQIMGVLTIISGAIMCLTIIGAAAGVPYIIGALNIFKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVVIM | Last |
1 | -68.800 | PF17319.2; D1ARU2_SEBTE/23-116; Family of unknown function (DUF5362 topsan) | ali | 100 | 1 | LKFIGLVQQIMGVLTIISGAIMCLTIIGAAAGVPYIIGALNIFKSGGAFGDTSRNESGESLREAIAGLAKGMKLMLIGFVIWIVLYILLMVVIM | 94 |
2 | -9.730 | PF17911.1; SKI2_SCHPO/59-187; Ski2 N-terminal region | ali follow.. | 12 | 38 | .KIMGYKEVPELIEDLNSKNSSSFLVRGSTSNIPFLADDSDVDAIAGEPSVKMALYGEDGLLQVPPGFSRGLSM.................... | 119 |
3 | -9.070 | PF15345.6; M4AQD5_XIPMA/9-221; Transmembrane protein 51 | ali follow.. | 22 | 2 | .................SGSQYALCALGVALGVVMIVWSLV--PANTGFNNSSSGSGGDDGIDGKRNKASSVAFVLAGSGVAMLLLSLCLGL.. | 77 |
4 | -7.520 | PF15713.5; G1Q275_MYOLU/58-209; Protein tyrosine phosphatase receptor type C-associated | ali follow.. | 21 | 114 | ...........................GSAGSSEALLSDLHAFAGSAAWDDSAGAAGGKGLHVT.............................. | 150 |
5 | -7.000 | PF11200.8; A7AQJ9_BABBO/2-370; Protein of unknown function (DUF2981 topsan) | ali follow.. | 21 | 4 | LFYIAIQQFLLGISLYSVIHYLHPSLTQLA----LLFGTNAISAVLGFMGALKRNIVME--------------------CVYLVFYAISLFLIF | 74 |
6 | -6.910 | PF16611.5; G3RQM1_GORGO/440-514; Unstructured region between RBD and GoLoco | ali follow.. | 25 | 8 | ......TDKQKGVPVKQSTAVNSSSRNHSATGEERTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGK........................ | 71 |
7 | -5.760 | PF11027.8; T1FNB3_HELRO/2-103; Protein of unknown function (DUF2615 topsan) | ali follow.. | 12 | 3 | .................GNFDPCECVWSHDAAMRRLLNLLR--NSQSYCTENECIQDLPGPSSDMSSSFYGFSMMTMMIIGWLVVATALFLL.. | 75 |
8 | -5.740 | PF06459.12; M3ZZY1_XIPMA/4218-4479; Ryanodine Receptor TM 4-6 | ali follow.. | 13 | 154 | .....LDVYLNKILNYLARNFYNLRFL--ALFVCFAINFILLFYKVTGEAEEEEEDEEHRLQESTGYMLPTLRFLVISLLCLVGYYCLKVPLVV | 262 |
9 | -5.580 | PF11326.8; H6BW88_EXODN/106-187; Protein of unknown function (DUF3128 topsan) | ali follow.. | 13 | 2 | ..........LSCRSALDYAMFCQSFGGQFVNI-YRYGTFR-FWLCMRTRNWDKKDREKAIQEHYRKKAVKWKTGPSSEDVW............ | 79 |
10 | -5.470 | PF12444.8; F6XIA1_MONDO/22-100; Sox developmental protein N terminal | ali follow.. | 13 | 41 | ...........................................LGSKVDPGEVDDRFPACIRDAVSQVLKGYDWSLVPMPV............. | 78 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Shiryaev SA, Ratnikov BI, Chekanov AV, Sikora S, Rozanov DV, Godzik A,Wang J, Smith JW, Huang Z, Lindberg I, Samuel MA, Diamond MS, Strongin AY. Cleavage targets and the D-arginine-based inhibitors of the West Nile virus NS3 processing proteinase. Biochem J. 2006 Jan 15;393(Pt 2):503-11. |