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current user: public |
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| Query: PF17382.2; I1Q6A1_ORYGL/1-89; Uncharacterized Ycf70-like, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . | |||||||
| # | Score | Template | Links and tools | %id | First | MVYGYGKSNMPHPNRKRKGTDTQYDYWEELLVMVSGLYALFCVFLVLFIFFDSFKQESNKLELSGKEEKKKLNGENRLSRDIQNLLYIK | Last |
| 1 | -89.000 | PF17382.2; I1Q6A1_ORYGL/1-89; Uncharacterized Ycf70-like | ali | 100 | 1 | MVYGYGKSNMPHPNRKRKGTDTQYDYWEELLVMVSGLYALFCVFLVLFIFFDSFKQESNKLELSGKEEKKKLNGENRLSRDIQNLLYIK | 89 |
| 2 | -9.140 | PF15102.6; TM154_HUMAN/24-165; TMEM154 protein family | ali follow.. | 20 | 51 | ...........................LEFILMVLIPLILLVLLLLSVVFLATYKRKRTKQEPSSQGSQSALQTYELGSENVKVPIF.. | 111 |
| 3 | -8.680 | PF11812.8; Q166A1_ROSDO/26-181; Domain of unknown function (DUF3333 topsan) | ali follow.. | 18 | 5 | ..............KKRNAAETRFKAYGLIAISIGLLMLITLIFNIVSRGTGAFQQTFVTLEVSLPAD..................... | 58 |
| 4 | -7.980 | PF16101.5; W5N606_LEPOC/37-156; Proline-rich membrane anchor 1 | ali follow.. | 14 | 44 | ............SQTPEPSVPQMKPWWKEIVIIGTVGCAVLFLLLMVIICYKAIKRKPLRKEENGTSRGEAMSSRNNKALDANNAV... | 119 |
| 5 | -7.060 | PF06129.12; Q6TUW2_YMTV5/4-111; Chordopoxvirus G3 protein | ali follow.. | 13 | 1 | ..................................LLTNLLFFIVFIIIAYCINY-YPTNKLQMAVKNLNYEYEVRKQQDTNFPQKL... | 51 |
| 6 | -7.030 | PF16883.5; Q2G176_STAA8/4-200; Domain of unknown function (DUF5080 topsan) | ali follow.. | 30 | 16 | .....................TAVMYSEKIVVLPIIIYAIVFVIIGITYIFDSYDQLTNFN............................ | 57 |
| 7 | -7.010 | PF15807.5; E2R4Y2_CANLF/1-130; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1 | ali follow.. | 13 | 14 | .........LLSPAEAQQATQYHLKPWLVGLAAVVGFLFIVFVLMLANRVWCSKVRAQDEEDTGFRMCSN................... | 74 |
| 8 | -6.980 | PF04608.13; A6VPE6_ACTSZ/27-170; Phosphatidylglycerophosphatase A | ali follow.. | 18 | 47 | LSFVAGCYLCQKTADDMGVHDPGSIVWDEFVGVWLCLSAVGAAAFAVFRFFDILKP-------IKIFDQKLENGFGIMIDDVLAAVY.. | 135 |
| 9 | -6.980 | PF06783.11; E7F7U5_DANRE/2-88; Uncharacterised protein family (UPF0239 topsan) | ali follow.. | 18 | 15 | ........................TFFESLLRYGLFLGAIFQLICILAVIIPTSKGHEQPVETSDPADTRSTDQNRKAK.......... | 69 |
| 10 | -6.540 | PF05640.14; U3JEN6_FICAL/1-206; Na,K-Atpase Interacting protein | ali follow.. | 19 | 136 | .................SGCLLDYQYIEVVSSATQIFLALF--FVYACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTS | 206 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Robinson-Rechavi M, Godzik A. Structural Genomics of Thermotoga maritima Proteins Shows that Contact Order Is a Major Determinant of Protein Thermostability. Structure (Camb). 2005 Jun;13(6):857-60. |