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Query: PF17751.1; I3K6L1_ORENI/489-589; SKICH domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100
# Score Template Links and tools%idFirst VTIIVDDEWNSVADATAIFKLAPNYSRSSWDWIGLFKVGFKHYKDYVGYVWAKQEESDFLRQEHQVTFTEEELPKGSGDFILGYYSNNMSSIVGVTEPFQILast
1 -67.400PF17751.1; I3K6L1_ORENI/489-589; SKICH domain  ali  100  1VTIIVDDEWNSVADATAIFKLAPNYSRSSWDWIGLFKVGFKHYKDYVGYVWAKQEESDFLRQEHQVTFTEEELPKGSGDFILGYYSNNMSSIVGVTEPFQI 101
2 -18.900PF16562.5; H2RZN3_TAKRU/65-184; N-terminal domain of E3 ubiquitin-protein ligase HECW1 and 2  ali follow..  18  29...........SEDLVVTWDIKEE--VDAGDWIGMYLLNELLSENFLDYLWKIEPSSHFPDAETQVCFR--------------YYHGASGALRATTPSVTV 115
3 -12.000PF17808.1; A0A067K7B9_JATCU/55-173; Fn3-like domain from Purple Acid Phosphatase  ali follow..  13  15...........TQWVTVDIV---HPEPTADDWVGVFSPAKFNGSTPIKYKYATDSNSQYTKTGQSTLKFQLINQRADFSFALFSGGLANPKLVAVSNSISF 117
4 -11.900PF17048.5; K1VRB6_TRIAC/530-694; Neutral/alkaline non-lysosomal ceramidase, C-terminal  ali follow..  13  49VLSQPPATVSMGSLVEARFTYAAVEKKNGDAWQQVR----SDRDWHLQYAWKRTNGLTGYSEVTISWQTGNDDHTEPGTYRLKYYGDSKAPVEGTSNEFVV 165
5 -10.200PF10342.9; Q7S2L6_NEUCR/26-121; Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family  ali follow..  10  7......EKVLAGLPCEIKWAPSSDPKFQGTVRIDVLGGTTPQTLDKVGTV-----ASGVDSSKGSYKWMVDAHLGKANTYGIQITLESNEKVFQYSFPFHI 96
6 -8.230PF17735.1; Q62P74_BACLD/48-168; Biofilm surface layer A  ali follow..  11  21.......TYRPNSILTVEFTLPSGFSATTKDTVNGRALTTGQILNNGKTVRLPLTIDLLGIAEFKLVLANKTLP-AAGKYTFRAENRGLGSTFYAESSIEV 118
7 -7.270PF17737.1; H0XJV4_OTOGA/22-112; Ig domain in C19orf38 (HIDE1)  ali follow..  7  1..LVPPHPSSQEDPIHISCVAPRGFLGAN---FTLYRGEHM----------VQFLEAPADQLGVIFNLSGSSSEAPGGPFQCQYGVMGEHS-SDFSKPVHV 89
8 -7.200PF12489.8; F7A8J5_HORSE/199-329; Nuclear coactivator  ali follow..  13  2....PLSEWLLGSKPAAARQAPYIPSANLQDWL--FSNVWGNLKGLENWLHKIAEKPSYQQSNSCSTTSSSSAEMEK........................ 90
9 -7.190PF15071.6; I3KPH8_ORENI/26-123; Transmembrane family 220, helix  ali follow..  28  2..................FALASYVQINDPDWMAGYGVP.............................................................. 25
10 -7.160PF02249.17; MCRX_METTH/318-443; Methyl-coenzyme M reductase alpha subunit, C-terminal domain  ali follow..  17  4...............................WLGSYMSGGVGFTQYATAAYTDDILDDFV-------------------YYGMEYVDDKYGICGTKPTMDV 54
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 3 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhang Y, Stec B, Godzik A. Between order and disorder in protein structures: analysis of "dual personality" fragments in proteins. Structure. 2007 Sep;15(9):1141-7.