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current user: public |
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| Query: PF18011.1; G4N797_MAGO7/564-712; C-terminal domain found in long catalases, from PfamA32U |
| . 10 . 20 . 30 . 40 . 50 . 60 . 70 . 80 . 90 . 100 . 110 . 120 . 130 . 140 . | |||||||
| # | Score | Template | Links and tools | %id | First | KTLRVGVLASTGNVASLSQAADLKARFMGDGVAVAVLGETQVEGVDVTYSQSDATVFDGIIIAAGAEGLVAKDAPASALFPIGRPQQLVVDSFRWGKPIGLAAASDDSANIFSSLGTTGPGVFSGDDLGVLVTDFKEGLSTYKFVERFP | Last |
| 1 | -73.000 | PF18011.1; G4N797_MAGO7/564-712; C-terminal domain found in long catalases | ali | 100 | 1 | KTLRVGVLASTGNVASLSQAADLKARFMGDGVAVAVLGETQVEGVDVTYSQSDATVFDGIIIAAGAEGLVAKDAPASALFPIGRPQQLVVDSFRWGKPIGLAAASDDSANIFSSLGTTGPGVFSGDDLGVLVTDFKEGLSTYKFVERFP | 149 |
| 2 | -30.000 | PF01965.24; PARK7_MOUSE/4-171; DJ-1/PfpI family | ali follow.. | 11 | 1 | ..KRALVILAKGA--EEMETVIPVDVMRRAGIKVTVAGLAGKDPVDTSLEDAKTGPYDVVVLPGGNLGAQNLS-------ESPMVKEILKEQESRKGLIAAICAGPTALLAHEVGFGCKVTTHPL........................ | 125 |
| 3 | -17.200 | PF17124.5; U4L1Y6_PYROM/15-242; ThiJ/PfpI family-like | ali follow.. | 10 | 1 | .......LANSGQDPT--EAAIPWSLLKTADCSVTFATEHGIVACRCANFDGLVSILDIVLLPGGHDK------PIRQYLESESLHRQLEKFLEPHKVLGAICHGVLSLAFAKCPVKQKSLLAEHNLQTTTLPRWMEATA......... | 192 |
| 4 | -13.700 | PF13507.6; A5WCV9_PSYWF/1086-1340; CobB/CobQ-like glutamine amidotransferase domain | ali follow.. | 16 | 3 | ...KVAILREQGVNGQL----EMAAGFVRAGFDAVDVHMS-----DLLEGRIDLRDFNGLVACGGFSYGDVLGAGSSILFHDELRMQFVRFFTRPDTFSLGVCNGCQMMAQLKDLGAENFPRFTYNKSARFEARTVN............ | 133 |
| 5 | -10.900 | PF07685.14; COBQ_PHOLL/253-451; CobB/CobQ-like glutamine amidotransferase domain | ali follow.. | 12 | 1 | ...DITVIRLPHIA----NFTDFNALAVQPDVRLRYVT-----------QPSALQPSDLIILPGSKNTLGDLQW-----LRQNGLADALLTAHQAGVPVIGICGGYQMLGKR..................................... | 89 |
| 6 | -10.600 | PF17385.2; R5GX63_9FIRM/441-661; Lacto-N-biose phosphorylase central domain | ali follow.. | 18 | 1 | ...KVAVLNSALYQKQNYSYAGIIEALSGAPFEVSFLSF------DDILADSLLKEIDVIINVGDGDTAHTGGAAWENPAVAAAIRKFVYEG---GGFIGVGEPS............................................ | 107 |
| 7 | -9.530 | PF01174.19; SNO3_YEAST/7-217; SNO glutamine amidotransferase family | ali follow.. | 15 | 1 | ......VLALQGAFIEHVKCIVENRDFYEKKLSVMTVK-----------DKNQLAQCDALIIPGGESTAMSLIAERTGFYD-----DLYAFVHNPSKVTWGTCAGLIYISQ...................................... | 93 |
| 8 | -9.330 | PF04204.16; A4VVY3_STRSY/19-316; Homoserine O-succinyltransferase | ali follow.. | 9 | 33 | RPIKILIL--NLMPQKIVTETQLLRLLANTPLQLEV-HSGHLKQFYKTFEQVRDSYFDGLIVTGAPVENLPFEEVD------HELTQVFDWSKTHVYSTLHICWGAQAGLYA..................................... | 150 |
| 9 | -8.690 | PF07722.13; A1RCW2_PAEAT/13-231; Peptidase C26 | ali follow.. | 10 | 3 | ....VLMSMGKGHDYQVMTHKYIQPLVEFSGCVPVLVPTCCGTDDLEQYLDM----ADGVYLTGAGSNIDPALYDQENEDRDLFDLPLIRAAIARGLPIFGICRGMQEINVA..................................... | 118 |
| 10 | -8.460 | PF16324.5; Q8A6W5_BACTN/209-459; Domain of unknown function (DUF4960 topsan) | ali follow.. | 9 | 2 | ......VGTASSVSLLSPEEKAAAQWMMDNVSMSEYISFK-----DVVDGKVDLGKYTAIWWHFHADNGDNPPLPD-----AKAAAEKFKVYYQNGGNLLLTRYATFYIANLGIAKDE............................... | 104 |
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9. Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018. Jaroszewski L, Li W, Godzik A. In search for more accurate alignments in the twilight zone. Protein Sci. 2002 Jul;11(7):1702-13. |