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Query: PF18099.1; B4D018_9BACT/390-498; DUF5010 topsan C-terminal domain, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .
# Score Template Links and tools%idFirst RSGNLDIRALTGSGWAVTNTAAGEWVQFDKIDFSPGNYRFAIRYATTTANSRMRLYVDGVALPDVPLPATTSMNTFDTISLGQKTIGWGTHTLKVMFVDGGVDLDWLFVLast
1 -63.200PF18099.1; B4D018_9BACT/390-498; DUF5010 topsan C-terminal domain  ali  100  1RSGNLDIRALTGSGWAVTNTAAGEWVQFDKIDFSPGNYRFAIRYATTTANSRMRLYVDGVALPDVPLPATTSMNTFDTISLGQKTIGWGTHTLKVMFVDGGVDLDWLFV 109
2 -42.100PF16990.5; D9SMC4_CLOC7/491-611; Carbohydrate binding module (family 35)  ali follow..  13  18.....SNKGYSGTGYVGNFGGATDNLSLNVTVDKGGEYSLIVRHSAPYGSKEYNVLVNGAVVATNKIQESSLFTDSTAVT---VKLTAGANTIKIDRGWGWFNVDCLML 118
3 -39.100PF03422.15; Q9Z4P9_BACCI/394-524; Carbohydrate binding module (family 6)  ali follow..  13  8.GSGFVLEGAFEGSLQLGGIQHGSYAAYKVDFGSDGAIGFIARASSGTGGGNIEIRLDGPKVGTLNVEGTGDWNQYIDAVTLAPSTITGVHDVYLVFTKTNFNLNWVKF 129
4 -20.900PF16871.5; D5SV52_PLAL2/46-235; Domain of unknown function (DUF5077 topsan)  ali follow..  11  6SIDPENEVRISRRGGNFSWSNASDRYSIYFRVDQPAEVQLSLNALIPEGTSSLLVSSGDQKW-TITLTGNE----LKNHVVGKLTITPGYVRVDLQGEAGKVFAEIANV 112
5 -17.500PF17829.1; C6CVT9_PAESJ/810-985; Gylcosyl hydrolase family 115 C-terminal domain  ali follow..  17  53....................STAPSLEYDINLTSAGQFPLEIYRINSKGKVRFAVSVDDESPIVVESGQGTIWHMIEKHVVKMPAMTAGKHTIKLWMVDSFMMIDKMVL 154
6 -15.900PF17133.4; Q8A055_BACTN/359-579; Domain of unknown function (DUF5108 topsan)  ali follow..  15  74.NTSGNWTKLMNNDALVVNIGYNGTLDLTIPPILAGKYRITLYYAYDPSMKFIGERGEGSQAGLTNVQDCFNTPLTSNLSGEAFEFTTASHTLNVVVVDPAASFDYILF 213
7 -13.300PF03944.14; C18BA_PAEPP/538-670; delta endotoxin  ali follow..  11  20......QENYGNSGDSLRLTGPTTAITYMLSGDGRTIYKLVLRVSGVITRITAKVRGNSINTVDNNQGITDNGSKFQDFEFRPTITIDAQTPIVLEFSATSFDLMNLIF 129
8 -11.800PF14683.6; B9HCP7_POPTR/484-672; Polysaccharide lyase family 4, domain III  ali follow..  12  57..............YTIGISNVKDWIIFELNVNRNENYTLRLALAS-ATASEIQVRFNNPSSDRPLFTGIHGLYWLYGIDVPGSQLVEGKNTIYLTQARSGVMYDYIRF 189
9 -8.580PF07705.11; Q8TPY5_METAC/349-453; CARDB  ali follow..  18  1.SADLGIQDVKVSHNGLAKAWNKLNNTVSVTVINNG--------PENADSFALELYSDGTPVESRQVTGLANGAT-ETVDFSWKPEDIKDYTLKAVVVPGS........ 91
10 -8.290PF18573.1; A0A0M0KVC3_9BACI/745-873; BclA C-terminal domain  ali follow..  19  40............................VFTVPTAGRYYITYQAKTTAALLGSRLIINGAPNLASTVNPVLSISEFNADVI--VTLAAGSTILQFFGLLGAATLQ.... 116
FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;