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Query: PF18869.1; A0A1F7Z354_9BACT/11-156; RnaseLS-like HEPN, from PfamA32U

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst WWSYIHQDLQELLRESVLLISTFGKWSKRFHDYAFIVFPAAKAYEGFLKTLFRDLGFISDETYFGKRFRVGKALNPALENHYREESIYDMLENYCQGKELPDALWETWKRGRNMLFHWFPNESNVISYGDAKQIIFEILETMDFAFLast
1 -88.000PF18869.1; A0A1F7Z354_9BACT/11-156; RnaseLS-like HEPN  ali  100  1WWSYIHQDLQELLRESVLLISTFGKWSKRFHDYAFIVFPAAKAYEGFLKTLFRDLGFISDETYFGKRFRVGKALNPALENHYREESIYDMLENYCQGKELPDALWETWKRGRNMLFHWFPNESNVISYGDAKQIIFEILETMDFAF 146
2 -39.500PF15935.5; I5B0B2_9DELT/91-316; RNase LS, bacterial toxin  ali follow..  14  120.YGRFDEKILKVMTPALSLMK----IDVELEDYSCCIYPALRGLEGYIRMLLSEFSKEYKTV-----GRLGSLFDEN--KSYETMLFLKDDIKNDVVCKSLQNAYFMYVKHRHPLFHTD........................... 226
3 -10.000PF09509.10; A9B999_HERA2/246-359; Protein of unknown function (Hypoth_ymh)  ali follow..  10  19...............................EYDTALSQVCIELDNAVKAK------------SGLKEDGTTLMRTAFSPKKTRLAIDPRFGNQQGFMDLFAGVMDAI---RNPRAHHHKSNLSADEAIEWLAFLSALFRVL.... 114
4 -9.470PF18735.1; A0A1J1KW75_9CYAN/16-205; RiboL-PSP-HEPN  ali follow..  10  39.YAHWEGFIKVAANSYLEFVAMQGLPYNQLSN---------NFIALAMKDQLDQAKDTNKATIYCEVADFFITKLTERSRIKYENRIATSNLSSSVFKEIVFML-EKLLGKRNKIAHGEYLDIDEQDYDELHQQIISMIDHFRNQI 188
5 -9.320PF09659.10; R7K0T6_9CLOT/71-437; CRISPR-associated protein (Cas_Csm6)  ali follow..  10  185......ASSERKYFEYALSVGIKLKKE----EYADFVRAITPLIVDLFEMILKKQCGVDVNAYCDVSERYKERFQYKDVYSVHLKLLIENISTDTELIQLINNVRSVEEGVRNLAAHQIISVTDETIRQRTGFTTTQIMDMIKRLF 343
6 -8.120PF18725.1; F8JQQ1_STREN/30-244; SAV2148-like HEPN  ali follow..  11  35....................................AYVWLNLVEQRLRAVVSAVLRPIYEPVHGEEWVTAAAGPAGHEWVQRAAAVREVSRRKGYLRELVVQHWPCFEPYRHVVSRNRALSG--TVLDQTERAAARLLAMLGGG. 175
7 -8.110PF18165.1; Q11MJ0_CHESB/181-315; Predicted pPIWI-associating nuclease  ali follow..  7  1.LAGFSQDLCDRWKGALYALNPINPDA-----ARHFCTSVREIFTEILDKWADNEDVLEADPNAELTPNKTGPSRRAKIRYLLKQKGADTPEMLGFVEQDIEDILQLFHV--NEATHGAAGKHGLTKLQHIRQRVEGGIMFL.... 135
8 -7.590PF09670.10; A8ZV88_DESOH/34-416; CRISPR-associated protein (Cas_Cas02710)  ali follow..  12  231..ADAAGCGEKPCPAYILDLFANAERRFDEGKTDDAVLRLYRIVEMAGQQRLMDTNGIDTSNAAPE--KLPAGLKSIYEEKYMDPESKTIKISMAAGYSLLKEMFLKIQDSRNHLAHGFRSARE-AAYMSLRDFIVSLNIF..... 382
9 -7.320PF18541.1; R5C8N0_9BACE/841-1011; RuvC endonuclease subdomain 3  ali follow..  10  7.........................INRDLRDTQYIARKAREILEDLVPMVVSTTGAVTDR--LREDWQLVDVMQELNWDKYAMKGLTEEWTDKDGRRISRIKEWTKRNDHRH---HAMDALTIAFTKHSFIQYLNNLNARSDK.. 120
10 -6.960PF17419.2; MAUJ_METEA/1-283; Methylamine utilization protein MauJ  ali follow..  9  152......AFAPDDLKPLLRLYQRARNASDPA--WRLLNA--YAVLKCWRAGK---------APFSLMPQQPAPVVTLEMLVHSGALGCAESFKDQP-----LASLVDALEVWRDAVLQDAPGEGAHGLRGEARWRLAHMASIAD... 272
FFAS is supported by the NIH grant R01-GM087218-01
1 4 8 1 0 5   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;